Streptococcus pneumoniae A026 (serotype 19F): T308_03555
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Entry
T308_03555 CDS
T02890
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
spnn
Streptococcus pneumoniae A026 (serotype 19F)
Brite
KEGG Orthology (KO) [BR:
spnn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spnn03019
]
T308_03555
03009 Ribosome biogenesis [BR:
spnn03009
]
T308_03555
Enzymes [BR:
spnn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
T308_03555
Messenger RNA biogenesis [BR:
spnn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
T308_03555
Ribosome biogenesis [BR:
spnn03009
]
Prokaryotic type
rRNA helicases
T308_03555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AGZ47487
LinkDB
All DBs
Position
694841..696184
Genome browser
AA seq
447 aa
AA seq
DB search
MSFTKFQFKNYIREALKELKFTTPTEVQDKLIPIVLAGRDLVGESKTGSGKTHTFLLPIF
QQLDEASDSVQAVITAPSRELATQIYQVARQISAHSDVEVRVVNYVGGTDKARQIEKLAS
NQPHIVIGTPGRIYDLVKSGDLAIHKAKTFVVDEADMTLDMGFLETVDKIAGSLPKDLQF
MVFSATIPQKLQPFLKKYLSNPVMEKIKTKTVISDTIDNWLISTKGHDKNAQIYQLTQLM
QPYLAMIFVNTKTRADELHSYLTAQGLKVAKIHGDIAPRERKRIMNQVQNLDFEYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLPGTAITLYQPSDDSDIRELEKL
GIKFSPKIVKDGEFQDTYDRDRRANREKKQDKLDIEMIGLVKKKKKKVKPGYKKKIQWAV
DEKRRKTKRAENRARGRAERKAKRQTF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttacgaaatttcaatttaaaaactatattagagaagccttgaaggagttaaaa
tttacaactccaacagaggtgcaagacaagttgattcctattgttttggcaggtcgtgac
ctagtaggagaatcaaaaacaggttcaggtaagactcatactttcttgttaccgattttt
cagcaattagatgaagctagcgatagtgtacaagcagtgattactgcaccgagtcgtgag
ttggctactcaaatttaccaagtagcgcgtcagatttcagctcactcagatgtcgaagtt
cgtgtggttaattatgtgggtggtacggataaggctcgccagattgagaaattggcaagc
aatcagcctcatattgttattggaacaccaggccgtatctacgacttggttaaatctggt
gatttagctattcataaagccaagacatttgttgttgatgaagcggatatgaccttggat
atgggattcttggaaactgttgataagattgctggcagtcttccaaaagacttgcaattc
atggtcttctcagcgactatcccacaaaaactgcaaccattcttgaaaaaatacttatcc
aatcctgttatggagaaaattaagaccaaaacggttatttctgacaccattgataattgg
ttgatttcgaccaagggacatgataagaatgctcaaatttaccagttgactcagttgatg
cagccgtatttggcaatgatttttgttaacactaaaacgcgtgctgatgaattgcattca
tatctgactgctcaaggcttgaaggttgcaaaaatccatggcgatattgcccctcgtgaa
cgcaagcgaatcatgaatcaggtgcaaaatctggattttgagtatattgtcgcaacagat
ttagcagcgcgtgggattgacattgaaggtgtcagccatgtcatcaatgatgccattccg
caagacttatctttttttgttcaccgtgttggtcgtactggacgaaatggcctaccaggt
acagctattaccctttatcagccaagtgatgactcggatatccgtgagttggagaaattg
ggaatcaagtttagtcctaagatagtcaaagatggggaatttcaagatacctatgaccgt
gatcgtcgtgccaaccgtgagaaaaaacaagataaacttgatatcgaaatgattggtttg
gttaaaaagaaaaagaaaaaagtcaaaccgggttataagaagaaaattcaatgggcggtt
gatgaaaagcgccgtaaaaccaagcgtgctgaaaatcgcgctcgcggtcgtgcagagcgt
aaagctaaacgccaaacattttaa
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