Streptococcus pneumoniae A026 (serotype 19F): T308_04465
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Entry
T308_04465 CDS
T02890
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
spnn
Streptococcus pneumoniae A026 (serotype 19F)
Brite
KEGG Orthology (KO) [BR:
spnn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spnn03032
]
T308_04465
03400 DNA repair and recombination proteins [BR:
spnn03400
]
T308_04465
Enzymes [BR:
spnn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
T308_04465
DNA replication proteins [BR:
spnn03032
]
Prokaryotic type
DNA Topoisomerases
T308_04465
DNA repair and recombination proteins [BR:
spnn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
T308_04465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
DUF2996
Toprim_4
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AGZ47651
LinkDB
All DBs
Position
869988..872075
Genome browser
AA seq
695 aa
AA seq
DB search
MATATKKKKSTVKKNLVIVESPAKAKTIEKYLGRNYKVLASVGHIRDLKKSSMSVDIENN
YEPQYINIRGKGPLINDLKKEAKKANKVFLASDPDREGEAISWHLAHILNLDENDANRVV
FNEITKDAVKNAFKEPRKIDMDLVDAQQARRILDRLVGYSISPILWKKVKKGLSAGRVQS
IALKLIIDRENEINAFQPEEYWTVDAVFKKGTKQFHASFYGVDGKKMKLTSNDEVKEVLS
RLTSKDFSVDQVDKKERKRNAPLPYTTSSMQMDAANKINFRTRKTMMVAQQLYEGINIGS
GVQGLITYMRTDSTRISPVAQNEVASFITDRFGSKYSKHGSKVKNASGAQDAHEAIRPSS
VFNTPESIAKYLDKDQLKLYTLIWNRFVASQMTAAVFDTMAVKLSQKGVQFAANGSQVKF
DGYLAIYNDSDKNKMLPDMVVGDVVKQVNSKPEQHFTQPPARYSEATLIKTLEENGVGRP
STYAPTIETIQKRYYVRLAAKRFEPTELGEIVNKLIVEYFPDIVNVTFTAEMEGKLDDVE
VGKEQWRRVIDAFYKPFSKEVAKAEEEMEKIQIKDEPAGFDCEVCGSPMVIKLGRFGKFY
ACSNFPDCRHTQAIVKEIGVECPSCHQGQIIERKTKRNRLFYGCNRYPECEFTSWDKPVG
RDCPKCGNFLMEKKVRGGGKQVVCSKGDYEEEKIK
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
gtggctacggcaacaaaaaagaaaaaatcaacagttaaaaaaaatctagtcatcgtggag
tcgcctgctaaggccaagacgattgaaaaatatctaggcagaaactacaaggttttagcc
agtgtcgggcatatccgtgatttgaagaaatccagtatgtccgtcgatattgaaaataat
tatgaaccgcaatatattaatatccgaggaaaaggccctcttatcaatgacttgaaaaaa
gaagctaaaaaagctaataaagtttttctcgcgagtgacccggaccgtgaaggagaagcg
atttcttggcatttggcccatattctcaacttggatgaaaatgatgccaaccgtgtggtc
ttcaatgaaatcaccaaggatgcagtcaaaaatgcttttaaagaacctcgtaagatcgat
atggacttggtcgatgcccaacaagctcgtcggatcttggaccgcttggtagggtattcg
atttcgcctattttgtggaagaaggtcaagaagggcttgtcagcaggtcgcgttcagtcc
attgcccttaaactcatcattgaccgtgaaaatgaaatcaatgccttccagccagaagaa
tactggacagttgatgctgtctttaaaaagggaaccaaacaatttcatgcttccttctat
ggagtagatggtaaaaagatgaaactgaccagcaatgacgaagtcaaggaagtcttgtct
cgtctgacgagtaaagacttttcagtagatcaggtggataagaaagagcgcaagcgcaat
gctcctttaccctataccacttcatctatgcagatggatgctgccaataaaatcaatttc
cgtactcgaaaaaccatgatggttgcccaacagctctatgaaggaattaatatcggttct
ggtgttcaaggtttgattacctatatgcgtaccgattcgactcgtatcagtcctgtagcg
caaaatgaggtggcaagcttcattacggatcgttttggtagtaagtattctaagcacggt
agcaaggtcaaaaacgcatcaggtgctcaggatgcccatgaggctattcgtccgtcaagt
gtctttaatacaccagaaagcatcgctaagtatctggacaaggatcagctcaagctatat
acccttatctggaatcgttttgtggctagccagatgacagcggccgtttttgataccatg
gctgttaaattgtctcaaaaaggggttcaatttgctgccaatggtagtcaggttaagttt
gatggttatcttgccatttataatgattctgacaagaataagatgttaccggacatggtt
gttggagatgtggtcaaacaggtcaatagcaaaccagagcaacatttcacccaaccgcct
gcccgttattctgaagcaacactgattaaaaccttagaggaaaatggggttggacgtcca
tcaacctacgcgccaaccattgaaaccattcagaaacgttattatgttcgcctggcagcc
aaacgttttgaaccgacagagttgggagaaattgtcaataagctcatcgttgaatatttc
ccagatatcgtaaacgtgaccttcacagctgaaatggaaggtaaactggatgatgtcgaa
gttggaaaagagcagtggcgacgggtcattgatgccttttacaaaccattctctaaagaa
gttgccaaggctgaagaagaaatggaaaaaatccagattaaggatgaaccagctggattt
gactgtgaagtgtgtggcagtccaatggtcattaaacttggtcgttttggtaaattctac
gcttgtagcaatttcccagattgccgtcatacccaagcaatcgtgaaagagattggtgtt
gagtgtccaagctgtcatcagggacaaattattgagcgaaaaaccaagcgtaatcgcctc
ttctatggttgcaatcgctatccagaatgtgaatttacctcttgggacaagcctgttggt
cgtgactgtccaaaatgtggcaacttcctcatggagaaaaaagtccgtggtggtggcaag
caggttgtttgtagcaaaggcgactacgaggaagaaaagattaaataa
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