Streptococcus pneumoniae SPN994039 (serotype 3): SPN994039_08280
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Entry
SPN994039_08280 CDS
T02631
Symbol
holB
Name
(GenBank) putative DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
spno
Streptococcus pneumoniae SPN994039 (serotype 3)
Pathway
spno03030
DNA replication
spno03430
Mismatch repair
spno03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPN994039_08280 (holB)
03430 Mismatch repair
SPN994039_08280 (holB)
03440 Homologous recombination
SPN994039_08280 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spno03032
]
SPN994039_08280 (holB)
03400 DNA repair and recombination proteins [BR:
spno03400
]
SPN994039_08280 (holB)
Enzymes [BR:
spno01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SPN994039_08280 (holB)
DNA replication proteins [BR:
spno03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SPN994039_08280 (holB)
DNA repair and recombination proteins [BR:
spno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SPN994039_08280 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
Motif
Other DBs
NCBI-ProteinID:
CCP34522
LinkDB
All DBs
Position
844408..845298
Genome browser
AA seq
296 aa
AA seq
DB search
MKQDQLKAWQPAQFDRFVRILEQDQLNHAYLFSGFFGSLEMAQFLAKSLFCTDKVGVLPC
EKCRSCKLIEQEEFPDVTLIKPVNQVIKTERIRELVGQFSQAGIESQQQVFIIEQADKMH
PNAANSLLKVIEEPQSEVYIFFLTSDEEKMLPTIRSRTQIFHFKKQEEKLILLLEQMGLV
KKKATLLAKFSQSRAEAEKLANQASFWTLVDESERLLTWLVAKKKESYLQVAKLANLADD
KEKQDQVLRILEVLCGQDLLQVRVRVILQDLLEARKMWQANVSFQNAMEYLVLKEI
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagatcaactaaaggcttggcaaccagctcagtttgaccgttttgtccgtatc
ttagaacaagaccagctcaatcacgcctatctcttttcaggtttctttggaagcttggaa
atggcgcaatttttagctaagagcctcttttgtacggataaagttggcgtcttaccatgt
gagaaatgccgaagttgcaagctgattgaacaggaagagtttccagatgtcaccttgatt
aagccagtcaatcaggtcatcaagacagaacgcattcgggaattggtgggacagttttct
caagcagggattgaaagccagcaacaggtctttattatcgagcaagcggataaaatgcat
cccaacgcagccaattctctgctcaaggtcatcgaagaaccccagagtgaagtttatatt
ttcttcttgactagcgatgaggaaaagatgttaccgacaatccgaagtcggactcagatc
ttccactttaaaaagcaagaagaaaaacttatcttactcttagaacaaatgggacttgtt
aagaaaaaagcgactcttttagctaagtttagtcaatcgcgagctgaagcagaaaagttg
gctaatcaggcaagtttttggaccttggtcgatgaaagtgaacgcctgctgacttggtta
gtagctaagaaaaaagaaagttatctacaggttgccaaattagccaacttggcagatgat
aaggaaaaacaggatcaggttttacggattcttgaagttctctgtgggcaggacctcttg
caggtaagagtaagagtgattctacaagatttactagaagctagaaaaatgtggcaagct
aatgtcagctttcaaaatgccatggaatatctggtcttgaaagaaatataa
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