Streptococcus pneumoniae SPN994039 (serotype 3): SPN994039_08600
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Entry
SPN994039_08600 CDS
T02631
Symbol
fpg
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
spno
Streptococcus pneumoniae SPN994039 (serotype 3)
Pathway
spno03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SPN994039_08600 (fpg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spno03400
]
SPN994039_08600 (fpg)
Enzymes [BR:
spno01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SPN994039_08600 (fpg)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SPN994039_08600 (fpg)
DNA repair and recombination proteins [BR:
spno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SPN994039_08600 (fpg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_8
Zn_ribbon_6
DUF7573
RNHCP
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
CCP34554
LinkDB
All DBs
Position
872180..873004
Genome browser
AA seq
274 aa
AA seq
DB search
MPELPEVETVCRSLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL
LFCLTDKVLISHLRMEGKYFYYPDQVPERKHAHVFFRFEDGGTLVYEDVRKFGTMELLVP
DLLDAYFISKKLGPEPSEQDFDLQVFQAALAKSKKPIKSHLLDQTLVAGLGNIYVDEVLW
RAQVHPARPSQTLTAEEATAIHDQTIAVLGQAVEKGGSTIRTYTNAFGEDGSMQDFHQVY
DKTGQECVRCGTIIEKIQLGGRGTHFCPNCQRRD
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaggttgaaaccgtttgtcgtagcttagaaaaattgattatagga
aagaagatttcgagtatagaaattcgctaccccaagatgattaagacggatttggaagag
tttcaaagggaattgcctagtcagattatcgagtcaatgggacgtcgtggaaaatatttg
cttttctgcctgacagacaaggtcttgatttcccatttgcggatggagggcaagtatttt
tattatccagaccaagtgcctgaacgcaagcatgcccatgttttcttccggtttgaagat
gggggcacgcttgtttatgaggatgtacgcaagtttggaaccatggaactcttggtgcct
gaccttttagacgcctactttatttctaaaaaattaggtcctgaaccaagcgaacaagac
tttgatttacaggtctttcaagctgcccttgccaagtccaaaaagcctatcaaatcccat
ctcctagaccagaccttggtagctggacttggcaatatctatgtggatgaggttctctgg
cgagctcaggttcatccagctagaccttcccagactttgacagcagaagaagcgactgcc
attcatgaccagaccattgctgttttgggccaggctgttgaaaaaggcggttccaccatt
cggacctataccaatgcctttggggaagatggaagcatgcaggattttcatcaggtctat
gataagactggtcaagaatgtgtacgctgtggtaccatcattgagaaaattcaactaggc
ggacgaggcacccacttttgtccaaactgtcaaaggagggactga
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