Streptococcus pneumoniae SPN994039 (serotype 3): SPN994039_09740
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Entry
SPN994039_09740 CDS
T02631
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
spno
Streptococcus pneumoniae SPN994039 (serotype 3)
Pathway
spno02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spno00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SPN994039_09740 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spno03021
]
SPN994039_09740 (rpoD)
Transcription machinery [BR:
spno03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SPN994039_09740 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DBD_HTH
DprA_WH
DUF2316
Motif
Other DBs
NCBI-ProteinID:
CCP34668
LinkDB
All DBs
Position
981332..982441
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AA seq
369 aa
AA seq
DB search
MATKQKEVTTFDVQVAEFIRNHKQKGTATDDEINASLVIPFTLDADGIEDLLQRIQDAGI
SITDNEGNPSARVLSNEEEPELSDEDLIGSTSAKVNDPVRMYLKEIGVVPLLTNEEEKEL
ALAVEAGDIEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQIA
ERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRIVLREQL
DEILDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRQPSRS
KPLRDFIED
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaaacaaaaagaagtaacaacatttgacgtacaggtagcagaatttatccgt
aatcataagcaaaaagggacagcaacagatgatgaaatcaatgcaagtctggttattcct
tttaccttggacgctgatgggattgaagatctcttgcaacggattcaggatgcaggcatt
tctatcacagataacgaaggaaatccaagtgcgcgtgttcttagcaatgaagaagaacca
gaactcagcgatgaggacttgattgggtcaacttctgctaaggtcaatgaccctgtccgt
atgtacttgaaagaaataggggtcgttcctctcttgaccaatgaagaggagaaagagttg
gcactggctgttgaagctggcgatatcgaagccaaacaacgtcttgcggaagccaatctt
cgtttggttgtttctattgccaaacgctatgtcggtcgtggcatgcagttccttgacttg
attcaagaaggaaatatgggcttgatgaaggcggttgacaagtttgactattctaaaggg
ttcaagttttcaacttatgcaacttggtggattcgtcaggctatcactcgtgctattgcg
gatcaagctcgtaccatccgtatcccagttcacatggttgaaactatcaataaattggtt
cgtgaacagcggaatctccttcaagaattggggcaagatccgacaccagaacagattgct
gaacgaatggatatgacacctgataaggttcgtgaaatcttgaagattgcccaagaacca
gtatctcttgaaactcctatcggtgaagaggacgatagccaccttggagactttatcgaa
gatgaagtgattgaaaatccagtggattatacgactcgtatcgtcttgcgtgagcaattg
gatgaaatcttagatactcttacagaccgtgaagaaaatgttctgcgtctacgttttgga
ctagatgatggaaaaatgcgcacacttgaagatgtggggaaagtctttaacgtaactcgt
gagcgtatccgtcagattgaagcaaaggctttgagaaaactacgccaaccaagccgcagc
aaaccgcttcgtgattttattgaagactaa
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integrated database retrieval system
