Streptococcus pneumoniae SPN034183 (serotype 3): SPN034183_07790
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Entry
SPN034183_07790 CDS
T02629
Symbol
csdB
Name
(GenBank) putative cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
spnu
Streptococcus pneumoniae SPN034183 (serotype 3)
Pathway
spnu00450
Selenocompound metabolism
spnu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spnu00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SPN034183_07790 (csdB)
Enzymes [BR:
spnu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
SPN034183_07790 (csdB)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
SPN034183_07790 (csdB)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
CCP32489
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All DBs
Position
783548..784774
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AA seq
408 aa
AA seq
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MLDVEAIRKDFPILDQIVNDEPLVYLDNAATTQKPLVVLKAINSYYEQDNANVHRGVHTL
AERATASYEAARETIRKFINAGSTKEVLFTRGTTTSLNWVARFAEEILAEGDRVLISVME
HHSNIIPWQEACRKTGAELVYVYLKDGALDMEDLRAKLTDKVKFVSLAHASNVLGVVNPI
KEITQLAHQVGAIMVVDGAQSTPHMKIDVQDLDLDFFAFSGHKMAGPTGIGVLYGKEKYL
EQMSPVEFGGEMIDFVYEQFASWKELPWKFEAGTPNMAGAIGLATAVDYLEKIGMDAVEA
HEQELIAYVYPKLQAIEGLTIYGSQDLAQRSGVIAFNLGDLHPHDLATALDYEGVAVRAG
HHCAQPLLQYLEVPATARASFYIYNTKADCDKLVDALQKTKEFFNGTF
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgttagatgtagaagcgattcgcaaggattttccaattttagatcagattgtcaatgat
gaacctctggtctatctggacaatgctgcgacgacacaaaaaccactagtagttctgaaa
gctattaacagttactatgagcaggacaatgccaatgttcaccgtggtgtccatacctta
gcggaacgagcgacagcttcttatgaagctgctcgtgaaaccattcgtaagtttattaat
gcaggctctacaaaggaagttctctttaccagaggaacgacaaccagccttaactgggtg
gcacgctttgctgaggaaattctcgctgagggagaccgggtcttgatttcagtaatggaa
caccattctaatatcattccatggcaggaagcttgtcgaaagactggagcagagcttgtc
tatgtctatcttaaagacggtgccttggatatggaggatttgcgagctaaattgactgat
aaggttaaatttgtttccctagctcatgcctccaatgttcttggtgtggtcaatccgatc
aaggaaatcactcaattagcccaccaagttggggcaattatggtagtggatggtgctcaa
tctacacctcatatgaagattgatgtccaggacttggatctggactttttcgccttttcg
ggtcacaagatggctggtccgactggtatcggtgtcctttacggcaaagaaaagtatctt
gagcaaatgtctccagtagaatttggcggcgagatgattgattttgtctacgagcaattt
gctagttggaaggaattgccttggaaatttgaggctggaacgccaaatatggcaggagct
attggacttgcgactgcagttgattatctggaaaagattggtatggatgccgttgaagct
catgaacaggaattgattgcgtacgtctatccaaaactgcaggcaattgagggattgacc
atttacggttctcaggatttggctcaacgttcgggtgttattgcctttaacctaggtgat
ctccatcctcacgatcttgcgacggctctggattatgaaggagtggctgttcgtgctggt
caccattgtgcgcaacccttgcttcagtatttggaagtcccagcaacagctcgtgcaagt
ttttatatctacaataccaaggcagattgcgacaaactagtcgatgccctacaaaagaca
aaggagtttttcaatggcactttctaa
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