Streptococcus pneumoniae SPN034183 (serotype 3): SPN034183_13900
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Entry
SPN034183_13900 CDS
T02629
Name
(GenBank) DEAD box helicase family protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
spnu
Streptococcus pneumoniae SPN034183 (serotype 3)
Pathway
spnu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spnu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPN034183_13900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spnu03019
]
SPN034183_13900
03009 Ribosome biogenesis [BR:
spnu03009
]
SPN034183_13900
Enzymes [BR:
spnu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SPN034183_13900
Messenger RNA biogenesis [BR:
spnu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SPN034183_13900
Ribosome biogenesis [BR:
spnu03009
]
Prokaryotic type
rRNA helicases
SPN034183_13900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
DUF6363
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CCP33100
LinkDB
All DBs
Position
complement(1411817..1413391)
Genome browser
AA seq
524 aa
AA seq
DB search
MKFNELNLSADLLAEIEKAGFVEASPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
EKIRTEEATIQALVIAPTRELAVQSQEELFRFGRSKGVKVRSVYGGSSIEKQIKALKSGA
HIVVGTPGRLLDLIKRKALKLQDIETLILDEADEMLNMGFLEDIEAIISRVPENRQTLLF
SATMPDAIKRIGVQFMKAPEHVKIAAKELTTELVDQYYIRVKEQEKFDTMTRLMDVAQPE
LAIVFGRTKRRVDELTRGLKIRGFRAEGIHGDLDQNKRLRVLRDFKNGNLDVLVTTDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKSGQSITFVSPNEMGYLQIIENLTKK
RMKGLKPASVEESFQSKKQVALKKIERDFADETIRANFEKFGKDARKLAAEFTPEELAMY
ILSLTVQDPDSLPEVEIAREKPLPFKPSGNGFGGKAKGGRGGRRGDDRRERDRRGNGRRD
EFKKGSRGNDRFDKEKRYRKDNKKPRNTLSEKQTGFVIRNKGDK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatttaatgaattaaacttgtctgctgatttgctagcagaaattgaaaaagctggt
tttgtagaagctagtcctatccaagaacaaactattcctttggcccttgaaggcaaggat
gttatcggtcaagctcagactggtacaggaaaaactgcagcctttggcttgcctaccctt
gaaaaaatccgtacagaagaagcgactatccaagctttggtcatcgctccaactcgtgaa
ctagctgttcaaagtcaagaagaactcttccgctttggtcgtagtaagggagtcaaagtc
cgttcagtatatggcggatcaagcattgaaaaacaaattaaggctcttaaatctggtgcc
catatcgtggtgggaactccaggtcgcctcttggacttgattaaacgcaaggccttgaaa
ttacaagacattgaaacccttatccttgacgaagcggatgaaatgcttaacatgggcttc
cttgaagacatcgaagccattatttcccgtgtacctgagaaccgtcaaactttgcttttc
tcagcaactatgccagatgccatcaaacgtatcggtgttcagtttatgaaagcccctgaa
catgtcaagattgcggctaaggaattgacaacagaattggttgaccagtactatatccgt
gttaaggaacaagaaaaatttgacaccatgactcgtctcatggatgtggcacaaccagaa
ctcgctattgtatttggtcgtaccaaacgccgtgtggatgaattgactcgtggtttgaaa
attcgtggcttccgtgcagaaggaattcatggcgacctagaccaaaacaaacgtcttcgt
gtccttcgtgactttaaaaatggcaatcttgatgttttggttacgacagacgttgcagcg
cgtggtttggatatttcaggtgtgacccatgtctacaactacgatattccacaagatcct
gagagttatgttcaccgtatcggtcgtacaggtcgtgctggtaagtcaggtcaatctatt
acttttgtttctccaaacgaaatgggttaccttcaaatcattgaaaacttgactaagaaa
cgcatgaaaggtctcaaacctgcaagtgtagaagaatccttccaatcaaaaaaacaggta
gctctcaagaaaatcgaacgtgattttgcagatgaaaccattcgtgccaactttgagaaa
tttggtaaggatgctcgcaaattggctgctgagtttactccagaagaattggcaatgtat
atcttgagtctgacagtccaagatccagatagccttccagaagtggagattgcacgtgaa
aaaccactaccgtttaaaccatcaggtaatggtttcggtggtaaagctaagggaggtcgt
ggaggccgtcgtggggacgaccgtcgagagcgtgatcgccgtggcaatggtcgccgtgat
gagttcaaaaaaggaagtcgtggcaacgatcgttttgataaggaaaaacgttaccgtaag
gataataaaaaaccacgcaatactttaagcgaaaagcaaacaggctttgttattcgtaac
aagggcgataaataa
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