Sphingomonas sp. NBWT7: F1C10_05375
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Entry
F1C10_05375 CDS
T11863
Symbol
gatB
Name
(GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
spnw Sphingomonas sp. NBWT7
Pathway
spnw00970
Aminoacyl-tRNA biosynthesis
spnw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spnw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
F1C10_05375 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
spnw03029
]
F1C10_05375 (gatB)
Enzymes [BR:
spnw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
F1C10_05375 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
F1C10_05375 (gatB)
Mitochondrial biogenesis [BR:
spnw03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
F1C10_05375 (gatB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
Motif
Other DBs
NCBI-ProteinID:
QNE31419
LinkDB
All DBs
Position
complement(1088469..1089932)
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AA seq
487 aa
AA seq
DB search
MADASAPYRIKGDTGEWEVVIGLEVHAQVTSNAKLFSGAATAFGAEPNSQVSLIDAAMPG
MLPVPNRECIRQAVRTGMAIEAQINKWSRFDRKNYFYADLPQGYQISQLYHPLVGEGVVE
IEDGDTVKTIGVERIHVEQDAGKLMHDQHPRLSYVDLNRSGVALMEIVSKPDMRSPAEAG
AYLTKLRAILRYVGSCDGNMDQGSMRADVNVSVRKPGDEFGTRTETKNVNSVRFVMAAIE
YEAKRQVAAIEAGERIVQETRLFNPDSGTTRSMRSKEDAHDYRYFPDPDLLPLELDDAFL
DECRASLPELPDAKRKRYEGLGITPYNADVLTAEVETARWFDALLETGAAPAAASNWVTG
ELFGALNRICKDITQSPVTPGQAAELLALVADSTLSGSLAKQVFEVMLETGDAPGKIVEE
RGLKQTSDTGAIEGVIAEVLAKNPNQLEQYRGGKEALFGFFVGQTMKAMGGKANPGVVNA
LLKKALG
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgcaagcgcaccgtatcgcatcaagggcgacaccggcgagtgggaggtcgtg
atcggccttgaggtgcacgcgcaggtgacatcgaacgccaagcttttctcgggcgcggcg
acggcgttcggcgcagagcccaattcgcaggtgagcctgatcgacgcggcgatgcccggc
atgctgcccgtgccgaaccgcgaatgcatccgtcaggcggtgcgcaccggcatggcgatc
gaagcgcagatcaacaaatggtcgcgatttgatcgcaagaactacttctacgccgatctg
ccgcagggctaccagatctcgcagctctaccatccgctggtcggggaaggcgtggtggag
atcgaggacggcgacaccgtcaagacgatcggcgtcgagcgcatccacgtcgagcaggac
gcgggcaagctgatgcatgatcagcatccgcgtctatcgtacgtcgatctcaaccgctcg
ggcgttgcgctgatggagatcgtgtcaaagcccgatatgcgatccccagccgaagcaggc
gcttatctgacgaagctgcgtgcgatcctgcggtacgtcggctcgtgcgacggcaacatg
gaccagggatcgatgcgcgccgacgtcaacgtcagcgtgcgcaagccgggcgacgagttc
ggcacgcggaccgagaccaagaatgtcaattcggtgcgcttcgtgatggcggcgatcgaa
tatgaggcgaagcgtcaggtcgccgcgatcgaggccggcgagcggatcgtgcaggagacg
cggctgttcaatcccgacagcgggacgacgcggtcgatgcgctcgaaggaagatgcgcac
gattatcgctacttccccgaccccgacctccttccgctcgaactcgacgatgcgtttctc
gacgagtgccgcgcgtcgctgcccgagctgccggacgccaagcgcaagcgctacgagggg
ctcggcatcacaccgtacaatgccgacgtgctgaccgccgaggtagagacggcgcgctgg
ttcgatgcgctgctcgaaacgggtgccgcgccggcagcagcgtcgaactgggtgacgggc
gagttgttcggcgcgctcaaccgcatctgcaaggatatcacccagtccccggtgacgccg
gggcaggcggccgagctgctcgcgctggtggcggacagtacgctgtccggcagccttgcc
aagcaggtgttcgaggtgatgctcgagacgggcgacgcaccgggcaagatcgtcgaagag
cgcgggctgaagcagaccagcgacaccggcgcgatcgagggggtgatcgccgaggtgctg
gcgaagaacccgaaccagctcgaacagtatcgcggcggcaaggaggcgctgttcggcttc
ttcgtcggtcagacgatgaaggcgatgggcggcaaggccaatcccggcgtcgtcaacgcg
ctgttgaagaaggcgctggggtaa
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