Sphingomonas sp. NBWT7: F1C10_14665
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Entry
F1C10_14665 CDS
T11863
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
Organism
spnw Sphingomonas sp. NBWT7
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GFIT
Motif
Pfam:
DEAD_assoc
WHD_Lhr
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QNE33036
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Position
3063386..3065836
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AA seq
816 aa
AA seq
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MTDTLPAPLADWFASRGWQPRRHQMAMLAEGRAGHHALLVAATGAGKTLAGFLPTLAELI
EAPSEGLHTLYVSPLKALAVDIQRNLVTPVAEMGLDALGIDIRIETRTGDTPSDRKARQR
ARPPQILLTTPESLSLLLSYPDSFTMFAGLKTIVIDEVHAFATGKRGDLLSLCMARLQAI
APGLRRVALSATVADADGYRAWLAPDGDIDAVSLVHGDQGVDPNIAILLPEDRVPWAGHS
GRYAAAQVMREIEAHRTTIVFCNTRSLAELIFQDLWKANDAQLPIGIHHGSLEKEARRKV
EAAMSAGRLRALVATASLDLGVDWGDVDCVIQMGAPKGSSRLLQRIGRSNHRLDESSEAL
IVPGNRFEYLEARAALDAVEAGELDADVFRTGALDVLAQHVMACACAAPFNQAALLDEVR
SALPYSALTDELFDKVLGFIRDGGYSLRAYDKFKRLTQDGEGPSRGSGQGLWRVSHPKFV
AQHRLNAGIIVEATMLKVRFRNGRALGKVEEAFASTLSHGDTFFFAGMSLEVEKIDTEDL
IVRATARPARIPTYGGSRMPLSTNLADRVRGFLATPEEWPRFPDDVREWLEIQARRSALP
RPDQLLVETFPREGRHYMVAYSFEGWNAHQSLGMLITRRMETAGLKPLGFVSNDYAIATY
SLDPITDPAALFSADILEHEFVEWVQQSHLLKRAFREVAVIGGLVERQHPGKRKTGKQVT
FSTDLIYDVLRKYEPSHILLEAAWADARARMTDVGRLAGLLDRAAETMLHVDLPRVSPLA
VPVLVLIGREKVATGSADDALLIEAEALAADAMRVD
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgacggatacgctgcccgccccgctcgccgactggttcgcctcgcgcgggtggcagccg
cggcggcaccagatggcgatgctggccgaggggcgcgcggggcaccacgcgctactggtg
gcggcgacgggcgcgggcaagacgctcgccgggttcctgccgacgctggccgagctgatc
gaggcgccgagcgaggggctgcacacgctgtacgtctcgccgctgaaggcgctggcggtc
gatatccagcgcaatctggtcacaccggtggcggagatggggctcgacgcgctcggcatc
gatatccgcatcgaaacgcgcaccggcgatacgccgtccgaccgcaaggcgcgtcagcgc
gcccgcccaccgcagatcctgctgacgacgcccgaatcgctctcgttgctgctgagctat
cccgacagcttcacgatgttcgcagggctgaagacgatcgtgatcgacgaggtgcacgcc
ttcgcgaccggcaagcgcggcgacctgttgtcgctgtgcatggcgcggttgcaggcgatc
gcgcccggcctgcggcgcgtcgcgctgtcggcgacggtggcggatgccgacggttatcgc
gcgtggctcgcgcccgatggcgatatcgacgcggtgagcctggtgcacggcgaccagggc
gtcgatccgaacatcgcgatcctgctgcccgaagatcgcgtgccgtgggcggggcattcg
gggcgctacgccgcggcgcaggtgatgcgcgagatcgaggcgcatcgcacgacgatcgtg
ttctgcaacacgcgcagtctcgccgagctgattttccaggatttgtggaaggcgaatgac
gcgcagctgccgatcggcattcatcacggcagcctggagaaagaggcgcggcgcaaggtg
gaggcggcgatgtccgccgggcggctgcgcgcgctggtggcgaccgcgagcctcgacctg
ggggtcgactggggcgacgtcgactgcgtgatccagatgggcgcgcccaagggatcgtcg
cggctgctgcaacggatcgggcgcagcaaccaccggctcgacgaatcgtccgaggcgctg
atcgtgccgggcaaccgcttcgaatatctcgaggcgcgcgcggcgctcgacgcggtggag
gcgggcgagctcgacgccgacgtgttccgcacgggcgcgctcgacgtgctggcgcagcac
gtgatggcgtgcgcgtgcgccgcgccgttcaatcaggcggctttgctggatgaggtgcga
tcggcgctcccctattcggcgctgaccgacgagctgttcgacaaggtgctcggcttcatt
cgcgacggtggttactcgctgcgcgcctatgacaagttcaagcggctgacgcaggacggc
gagggcccttcgagaggctcaggacagggactgtggcgcgtgagccaccccaagttcgtc
gcgcagcaccggctgaacgcggggatcatcgtcgaggcgacgatgctcaaggtgcgcttt
cgcaacggccgcgcgctgggcaaggtggaagaggcgttcgcctccacgctgagccacggc
gacaccttcttcttcgcgggcatgagcttggaagtggagaagatcgacaccgaggacctg
atcgtgcgcgcgacggcgcggccggcgcggatccccacctatggcggcagccgcatgccg
ctgtcgaccaacctcgccgatcgcgtgcgcgggttcctggcgacgcccgaggaatggccg
cgctttcccgacgacgtgcgcgagtggctggagatccaggcgcgccgctccgcgctgccg
cgccccgatcagctgctggtcgagaccttcccgcgtgaggggcggcattacatggtcgcc
tatagctttgaagggtggaacgcgcaccagtcgctcggcatgctgatcacgcggcggatg
gagacggcggggctgaagccgctggggttcgtgtcgaacgattacgcgatcgcgacctat
tcgctcgatccgatcaccgaccccgcggcgctgttctccgccgacatccttgagcacgag
ttcgtcgagtgggtgcagcaatcgcacctgctgaagcgcgcattccgcgaggtggcggtg
atcggcgggctggtcgagcggcagcacccgggcaagcgcaagacgggcaagcaggtgacc
ttctcgaccgacctcatctacgacgtgctgcgcaagtacgagccgagccacatcctgctg
gaggcggcgtgggccgatgcgcgcgcgcggatgaccgatgtggggcggctcgccgggctg
ctcgaccgcgcggcggagacgatgctgcacgtcgacctgccgcgcgtgtcgccgctcgcg
gtgccggtgctggtgctgatcgggcgcgagaaggtggcgacgggcagcgccgacgacgcg
ctgctgatcgaggctgaggcgctggcggcggatgcgatgcgggtcgactga
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