Schizosaccharomyces pombe (fission yeast): 2538699
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Entry
2538699 CDS
T00076
Symbol
sec231, SPOM_SPCC31H12.07
Name
(RefSeq) COPII cargo receptor subunit Sec23a
KO
K14006
protein transport protein SEC23
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
2538699 (sec231)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spo04131
]
2538699 (sec231)
Membrane trafficking [BR:
spo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
2538699 (sec231)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
Gelsolin
zf-Sec23_Sec24
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
2538699
NCBI-ProteinID:
NP_587900
PomBase:
SPCC31H12.07
SPCC31H12.07.1
UniProt:
O74873
LinkDB
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Position
III:join(634309..634339,634389..634560,634620..634651,634717..636761)
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AA seq
759 aa
AA seq
DB search
MNFEEIEERDGVRFTWNVFPSTRIESSRTIVPIASIYKPLNERPDLPPVLYEPVTCKAPC
KAVLNPYCHIDTRAKFWICPFCLQRNMLPPQYKDISNTSLPIELLPEYSTIEYTLPRPPQ
LTPVFLFVVDVCQDEENLQALKDSLIISLSLLPPECLVGLVTFGTMVDVYELGYTECSKS
YVFRGSKDYTSKQIQEMLGLPTSNVSPVALQQARSFQGSAAPSRFLLPIQQCEFQLTNIL
EQLQPDSWPVANDRRPQRCTGTALNISVSMMESVCPNSGGHIMLFAGGPSTVGPGTVVST
ELREPIRSHHDIERDQAKHVKKALRFYEGLTKRVSANGHAVDILAGCLDQIGIMEMKSLA
SSTGGYLVLSDSFTTSIFKQSFQRIFGRDSLNNMLLGFNATMEVLTTKELKISGLIGHAV
SLNKKSQNVGDIEIGLGNTNSWKMCGISPKSTYAIYFEVATQSASAPQGDSRGLVQYLTL
YQHSSNTFRLRVTTVARAFADGGSPLIVNSFDQEAAAVAMARIAAFKAEVDDGPDVLRWT
DRMLIKLCQKFAEYRKDDPSSFRLSSQFTLYPQFMYYLRRSPFLQVFNNSPDETAFYRHM
LNHEDVNNSLIMIQPTLQSFSFEHPGGVPVLLDAVSVKPDVILLLDTFFHILIFHGDTIA
QWRNAGYQNQPEYQNLKELLEAPRVEAAELLIDRFPIPRFIVCDQGGSQARFLLSRLNPS
ETHNTTSMYGAPPAHAILTDDVSLQTFMSHLKKLAVAVS
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcgaagaaatcgaagaacgtgacggagttcgttttacctggaacgtgtttcca
tcgacgagaattgaaagttcacgaacgatcgttcctattgcttcgatttacaaaccttta
aatgagcgtcctgatttaccacctgttctatatgaacctgttacttgcaaggctccatgc
aaagctgttttaaatccctactgccatattgacactcgtgcaaagttctggatttgtcca
ttttgtcttcaacgtaatatgttaccacctcaatataaggacatttccaatactagtttg
ccaattgagttattgccggaatattctacgattgaatatactttgcccagaccaccccaa
ctcactccagtctttcttttcgtggttgatgtctgccaggacgaagaaaacttgcaagct
ttaaaagattctttaatcattagcttaagcttactcccccctgaatgcctagttggctta
gttacctttggcaccatggtagatgtttatgaacttggctacactgaatgttctaaatct
tatgttttccgcggatctaaggactacacttccaagcagattcaggaaatgcttggtttg
cccactagtaatgtttctccagtcgccttacaacaagctcgctctttccaaggctcggct
gctccatcgcgcttcctccttcccattcaacagtgtgaatttcaacttactaacatcctc
gaacaactacaacctgattcttggcctgttgccaatgacagacgtcctcaacgttgtact
ggtaccgctttgaacatttctgtaagcatgatggaaagtgtttgtcccaacagtggtggt
catattatgctttttgctggtggccctagcaccgttggtcctggaactgttgtttctacc
gaacttcgtgagccaattcgttcgcatcacgacattgaacgtgaccaggcaaagcacgta
aagaaggcactgcgcttttatgaaggccttaccaaacgtgtcagcgccaatggacatgct
gtagacattcttgccggatgtctggatcaaatcggaattatggaaatgaaaagcctggct
tctagcactgggggttaccttgttctatctgattctttcactacttctatctttaagcaa
agttttcaaagaatatttggtcgtgattctttgaataatatgcttcttggatttaatgca
actatggaggtccttacaactaaggagttgaaaatttccggtcttatcggccacgcagta
tccctaaacaagaaatcacaaaatgttggcgatatcgaaattggccttggtaacactaat
agttggaaaatgtgtggtatatcaccaaagtccacttatgccatttactttgaagtagct
actcaaagtgcctctgcccctcagggggactctcgaggtttggtacaatatctaaccttg
tatcaacattcatcaaacacattccgacttcgtgtaacaacagtggctcgcgcttttgct
gatggaggtagtccattgatcgtaaattcatttgatcaagaagctgctgctgttgctatg
gctcgtattgcagctttcaaagcggaagtcgatgatggacctgacgtccttcgatggacc
gaccgaatgctgatcaaactttgtcaaaagtttgctgagtatagaaaagatgatccgtca
agtttccgtctctcttcacaatttaccctttaccctcaatttatgtattacttacgacgt
agcccctttctgcaagtttttaacaattcaccagatgagactgcattttatcgtcacatg
ctcaaccatgaagatgttaacaattctcttattatgattcaacctaccttgcaatcattt
tctttcgaacaccctggtggcgttccagtgctgctggacgctgtatctgtaaaaccggat
gttattctcttgctcgatactttcttccatattctaattttccatggggacactatagcc
caatggagaaatgctggctatcaaaatcagcctgaataccaaaacctaaaagaactttta
gaagctcctagagtcgaagcagcggagttgcttattgatcgattcccgatccctcgattt
atcgtttgtgaccagggaggcagtcaggcacggtttcttctttctcgccttaatccttct
gaaacgcacaacactacgtctatgtatggtgctccacctgctcatgctattttaactgat
gatgtctccttacaaaccttcatgagtcatctgaaaaaacttgccgtagctgtttcataa
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