Schizosaccharomyces pombe (fission yeast): 2538709
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Entry
2538709 CDS
T00076
Symbol
pmd1, SPOM_SPCC663.03
Name
(RefSeq) leptomycin transmembrane transporter Pmd1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
2538709 (pmd1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spo02000
]
2538709 (pmd1)
04147 Exosome [BR:
spo04147
]
2538709 (pmd1)
04090 CD molecules [BR:
spo04090
]
2538709 (pmd1)
Enzymes [BR:
spo01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
2538709 (pmd1)
Transporters [BR:
spo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
2538709 (pmd1)
Exosome [BR:
spo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
2538709 (pmd1)
CD molecules [BR:
spo04090
]
Proteins
2538709 (pmd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
RsgA_GTPase
AAA_21
AAA_30
AAA_22
AAA_29
Zeta_toxin
AAA_16
AAA_23
Motif
Other DBs
NCBI-GeneID:
2538709
NCBI-ProteinID:
NP_001342744
PomBase:
SPCC663.03
SPCC663.03.1
LinkDB
All DBs
Position
III:1635974..1640062
Genome browser
AA seq
1362 aa
AA seq
DB search
MSLHSKKSTSTVKDNEHSLDLSIKSIPSNEKNFSTEKSENEASESHVVDVVKDPFEQYTP
EEQEILYKQINDTPAKLSGYPRILSYADKWDIMLQLAGTITGIGAGLGMPLMSLVSGQLA
QAFTDLASGKGASSFQHTVDHFCLYFIYIAIGVFGCSYIYTVTFIIAGERIARRIRQDYL
HAILSQNIGYFDRLGAGEITTRITTDTNFIQDGLGEKVGLVFFAIATFVSGFVIAFIRHW
KFTLILSSMFPAICGGIGLGVPFITKNTKGQIAVVAESSTFVEEVFSNIRNAFAFGTQDI
LAKLYNKYLITAQRFGINKAIAMGLMVGWMFFVAYGVYGLAFWEGGRLLHAGDLDVSKLI
GCFFAVLIASYSLANISPKMQSFVSCASAAKKIFDTIDRVSPINAFTPTGDVVKDIKGEI
ELKNIRFVYPTRPEVLVLDNFSLVCPSGKITALVGASGSGKSTIIGLVERFYDPIGGQVF
LDGKDLRTLNVASLRNQISLVQQEPVLFATTVFENITYGLPDTIKGTLSKEELERRVYDA
AKLANAYDFIMTLPEQFSTNVGQRGFLMSGGQKQRIAIARAVISDPKILLLDEATSALDS
KSEVLVQKALDNASRSRTTIVIAHRLSTIRNADNIVVVNAGKIVEQGSHNELLDLNGAYA
RLVEAQKLSGGEKDQEMVEEELEDAPREIPITSFGDDDEDNDMASLEAPMMSHNTDTDTL
NNKLNEKDNVVFEDKTLQHVASEIVPNLPPADVGELNEEPKKSKKSKKNNHEINSLTALW
FIHSFVRTMIEIICLLIGILASMICGAAYPVQAAVFARFLNIFTDLSSTDFLHKVNVFAV
YWLILAIVQFFAYAISNFAMTYAMEAVLQRIRYHLFRTLLRQDVEFFDRSENTVGAITTS
LSTKIQSLEGLSGPTLGTFFQILTNIISVTILSLATGWKLGLVTLSTSPVIITAGYYRVR
ALDQVQEKLSAAYKESAAFACESTSAIRTVASLNREENVFAEYCDSLIKPGRESAIASLK
SGLFFSAAQGVTFLINALTFWYGSTLMRKGEYNIVQFYTCFIAIVFGIQQAGQFFGYSAD
VTKAKAAAGEIKYLSESKPKIDTWSTEGKKVESLQSAAIEFRQVEFSYPTRRHIKVLRGL
NLTVKPGQFVAFVGSSGCGKSTTIGLIERFYDCDNGAVLVDGVNVRDYNINDYRKQIALV
SQEPTLYQGTVRENIVLGASKDVSEEEMIEACKKANIHEFILGLPNGYNTLCGQKGSSLS
GGQKQRIAIARALIRNPKILLLDEATSALDSHSEKVVQEALNAASQGRTTVAIAHRLSSI
QDADCIFVFDGGVIAEAGTHAELVKQRGRYYELVVEQGLNKA
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgcatagtaaaaaatccacttctacggttaaggataacgaacattctttggac
ctttctatcaaaagcataccttcaaatgaaaaaaacttttcaacagagaaaagcgagaat
gaggcttctgaaagccacgtggtagatgttgtcaaagatccttttgaacagtatactcct
gaagaacaagaaatcctttacaaacaaattaatgacacacctgccaaactttctggatac
cctagaatcctttcatacgccgataaatgggatattatgctgcaattggcaggcaccatt
actggtattggtgccggcctgggtatgccattgatgtcccttgtatccggtcagctggct
caagcttttaccgaccttgcctctggcaaaggagcgtcatctttccaacacactgtagat
cacttttgtctttattttatttacatcgcaattggtgtctttggctgttcatatatttac
actgtaacctttattattgcaggagagcggattgcccgtcgtattcgacaagattatttg
catgccattctttcccaaaatatcggttatttcgatcgtctaggtgccggtgaaattacc
actcgaattactactgatacaaactttattcaagatggtttaggtgagaaggtcggattg
gtgttctttgcaatagcaacctttgtatctggttttgttatcgcttttattcgtcattgg
aagttcacattgatattgagttcaatgtttccagccatttgtggtggtatcggcttgggt
gttccctttattaccaaaaacaccaaaggtcaaatcgccgtcgttgccgaatccagtaca
tttgtggaagaagtgttttccaatatcagaaatgcttttgcttttggtacccaagatatt
cttgcaaaattgtacaataagtacttaataactgcacaacgcttcggtatcaataaggca
attgcaatgggtttaatggttggatggatgttctttgttgcgtatggtgtttacggtctt
gcattttgggaaggtggacgcctcctacatgcaggtgatttagatgttagcaaattaatt
ggctgctttttcgccgtccttattgcttcctatagtttggccaacatttctcctaagatg
cagtcatttgttagttgtgcctcagccgctaaaaagattttcgacacaattgatcgtgtt
agtccaattaatgcttttacacctactggtgatgtagtcaaagatattaaaggggagatc
gaattgaaaaatattcgatttgtttatcctactcgtcctgaagttttagtgctggataac
ttttctttggtatgcccttctggtaaaattactgctttagtaggtgccagtggtagcggc
aaatccacgatcattggacttgttgagcgattttacgaccccattggtgggcaggttttc
ttagatggtaaagaccttagaacgctgaacgttgcttcgctgagaaatcaaatatctttg
gtacaacaagaaccggttctgtttgctacaactgtgtttgaaaatataacttatggcctg
cctgatacaattaaaggtaccttgtctaaggaagaattggaaagaagagtttatgatgcc
gctaagcttgccaacgcttacgactttattatgacattacccgagcaattttcaactaat
gttggacaacgcggtttccttatgtcaggaggacaaaaacaaagaattgcaatcgctagg
gccgttattagtgatcccaagatcttattgttggacgaagccacaagtgctttagactct
aagagtgaagtgcttgttcagaaagctctagataatgcatcgagatctcgtaccactatc
gttattgctcatcgtctttctacaattcgtaacgctgataatattgtcgtagtgaatgca
ggaaaaattgttgaacagggctcccacaatgaattgttagatctgaatggtgcttatgct
agactagtagaagctcaaaagctatcaggtggagaaaaagaccaggaaatggtcgaggaa
gaactggaggatgctccgagggaaatacccataacgtcttttggtgacgatgatgaagat
aatgatatggctagcctcgaggcccctatgatgtcccataatacggatactgatacgttg
aataataaactcaacgagaaagataatgtcgtgtttgaagacaaaacccttcagcatgta
gcttccgaaattgttccaaacctacctcctgcagatgtcggtgaacttaatgaggagcct
aaaaagtccaaaaagtcaaagaaaaacaaccatgagattaattcgttaacagcgttatgg
ttcattcattcttttgtacggacaatgatagagattatttgtctattaattggtattttg
gcttctatgatttgtggtgcagcttaccctgttcaggcagctgtttttgcaagatttctc
aatatcttcactgatctctcatccacagactttttacacaaagtaaacgtgtttgctgtt
tattggcttattctagctattgttcaattcttcgcttatgcaatttccaattttgcaatg
acttatgcaatggaagcagttttgcaaagaattcgttatcatctatttcgaacattgctt
cgtcaagatgttgagtttttcgaccgtagtgagaacacagttggtgctattactacttct
ttatcaacgaaaattcagtctttggagggattgagcggcccgactttaggaacctttttc
caaattttgaccaatatcatttcagttacgattttatctttggctacaggatggaagttg
ggtttggtgaccctttcgacctcccctgttatcattactgctggttattaccgtgtacgt
gctcttgatcaagtccaagagaagttgtctgctgcctacaaagagtcagctgcgttcgca
tgcgagtcaacttcagccattcgtacagtcgctagtcttaatcgcgaagaaaacgttttt
gctgagtattgtgattctctcatcaaacctggccgtgagtcggcaatcgcatcattgaaa
tctggtttattcttttctgctgctcaaggtgttacctttttgattaacgcattgacattt
tggtatggttctaccttaatgcgcaagggcgaatataacatcgttcagttttatacttgt
tttattgcaattgtctttggtatacaacaagctggtcaattctttggttactcagcagat
gtaacaaaagcaaaggctgctgccggtgaaattaagtatttgtccgaatcaaaacctaaa
attgatacatggtcgacggaaggaaagaaagttgaatcccttcaaagtgcagcaattgaa
ttcaggcaagttgaatttagttaccctaccagaaggcatattaaagttcttcgtggtttg
aacctcactgtgaagcccgggcagtttgtcgcattcgtaggatcttctggctgtggtaaa
tctacgaccattgggcttatcgagcgtttctacgattgcgacaatggagctgtattggtg
gacggtgttaatgttcgtgactataacattaacgactaccgcaaacaaattgcccttgtc
tctcaagagccaacgttgtaccaaggtactgttcgtgagaacattgttttgggcgcatct
aaagatgtctctgaagaagagatgattgaagcttgcaagaaggccaatattcatgagttt
attcttggattgcccaacggttataacacactttgcggtcaaaagggctcttccttatct
ggtggtcaaaaacagcgtattgccattgctagagcattaattagaaatccaaagattctc
cttttagatgaagcaaccagtgctttagacagtcatagcgaaaaggtcgttcaagaagct
ttaaatgccgcctctcaaggtagaaccacggtagcaattgctcatcgtttgtcttctatc
caagatgcagactgtattttcgtatttgatggtggtgttatcgctgaagctggtactcat
gccgagcttgttaaacagcgcggtcgttactatgaacttgtggttgaacagggattgaac
aaagcataa
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