Schizosaccharomyces pombe (fission yeast): 2538781
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Entry
2538781 CDS
T00076
Symbol
ssb2, SPOM_SPCC1753.01C
Name
(RefSeq) single-stranded DNA-binding protein Ssb2
KO
K10739
replication factor A2
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03030
DNA replication
spo03420
Nucleotide excision repair
spo03430
Mismatch repair
spo03440
Homologous recombination
spo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
2538781 (ssb2)
03420 Nucleotide excision repair
2538781 (ssb2)
03430 Mismatch repair
2538781 (ssb2)
03440 Homologous recombination
2538781 (ssb2)
03460 Fanconi anemia pathway
2538781 (ssb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spo03032
]
2538781 (ssb2)
03400 DNA repair and recombination proteins [BR:
spo03400
]
2538781 (ssb2)
DNA replication proteins [BR:
spo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
2538781 (ssb2)
DNA repair and recombination proteins [BR:
spo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
2538781 (ssb2)
MMR (mismatch excision repair)
2538781 (ssb2)
DSBR (double strand breaks repair)
HR (homologous recombination)
2538781 (ssb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
RMI2
UPF0147
Motif
Other DBs
NCBI-GeneID:
2538781
NCBI-ProteinID:
NP_588227
PomBase:
SPCC1753.01c
SPCC1753.01c.1
UniProt:
Q92373
LinkDB
All DBs
Position
III:complement(join(1540948..1541661,1541789..1541914))
Genome browser
AA seq
279 aa
AA seq
DB search
MAYDAFGKPGYGPDFNSAFSPGMGGGAGFNEYDQSSQPSVDRQQGAGNKLRPVTIKQILN
ASQVHADAEFKIDGVEVGQVTFVGVLRNIHAQTTNTTYQIEDGTGMIEVRHWEHIDALSE
LATDTYVRVYGNIKIFSGKIYIASQYIRTIKDHNEVHFHFLEAIAVHLHFTQKANAVNGA
NAPGYGTSNALGYNNISSNGAANSLEQKLAEYSLTPAQMTVMQAIHSAPETNEGVHVRQL
AQSVGPGIDLTAVTDFLQQEGIIYTTIDENHFKSVLQDQ
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggcttatgatgcttttggcaagccgggctatggtcccgacttcaatagcgctttttct
ccaggaatgggaggaggcgctggatttaatgaatatgatcaatcgagccagcccagcgtc
gatagacaacaaggagctggaaataaattacgtcctgttaccattaagcaaattctcaat
gcctctcaagttcacgctgatgcagaattcaagatagatggcgttgaagtcggacaggtt
acttttgtaggagttttacggaacattcacgctcaaactacaaacacaacatatcaaata
gaagatggaacaggaatgattgaagtaaggcattgggaacacattgatgcgctatctgaa
cttgctacagacacctatgttcgtgtgtatggaaacatcaaaatattttctggaaaaatt
tacattgcttctcaatacatccgtacaattaaagaccataatgaagtccattttcatttc
cttgaagcaattgctgtacacctacatttcactcagaaagcaaatgctgtgaacggagcc
aacgctccaggctacggaacttccaacgcactaggctacaataacatttcttcaaatggt
gctgccaactctctggaacaaaaactagctgaatattcactaacccccgcacaaatgacc
gttatgcaagctatccatagtgcaccagagacgaatgaaggtgttcacgttagacaactt
gctcaaagcgtgggtcccggtatagaccttacggcggttactgattttcttcaacaagaa
ggaatcatctacacaacaattgatgaaaatcattttaaaagtgttttacaagaccaataa
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