Schizosaccharomyces pombe (fission yeast): 2538816
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Entry
2538816 CDS
T00076
Symbol
rpb3, SPOM_SPCC1442.10C
Name
(RefSeq) DNA-directed RNA polymerase II complex subunit Rpb3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03020
RNA polymerase
spo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
2538816 (rpb3)
09124 Replication and repair
03420 Nucleotide excision repair
2538816 (rpb3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spo03021
]
2538816 (rpb3)
03400 DNA repair and recombination proteins [BR:
spo03400
]
2538816 (rpb3)
Transcription machinery [BR:
spo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
2538816 (rpb3)
DNA repair and recombination proteins [BR:
spo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
2538816 (rpb3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
2538816
NCBI-ProteinID:
NP_588324
UniProt:
P37382
Structure
PDB
PDBj
LinkDB
All DBs
Position
III:complement(join(1785998..1786761,1786808..1786857,1786900..1786979))
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AA seq
297 aa
AA seq
DB search
MDSETHITIRNISKNSVDFVLTNTSLAVANSLRRVVLAEIPTVAIDLVEINVNTSVMPDE
FLAHRLGMIPLDSSNIDEPPPVGLEYTRNCDCDQYCPKCSVELFLNAKCTGEGTMEIYAR
DLVVSSNSSLGHPILADPKSRGPLICKLRKEQEISLRCIAKKGIAKEHAKWSPTSAVAFE
YDPWNKLQHTDYWFENDADAEWPKSKNADWEEPPREGEPFNFQEEPRRFYMDVESVGSIP
PNEIMVQGLRILQEKLAVLVRDLDEEQPTQLSANELNMEENAEMNWSPYQNGEENTW
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggattcagaaacgcatattacgatacgaaatataagtaaaaactcggtggattttgtc
cttacaaatacaagtttggcagttgcaaactcgctgcgacgtgttgtacttgcagagatt
ccaacagtggccattgacctagttgaaattaatgtgaatacctcagtcatgcctgatgag
tttctagcacatcgtcttggtatgatacctctggatagctccaacatcgatgaaccgcct
ccagtaggtttggaatatacgcgcaattgcgattgcgatcagtattgtcccaagtgttca
gtcgagttgttcctaaatgccaaatgtactggtgagggtacgatggaaatttatgctaga
gatcttgttgtttcttctaactcttctcttggacaccctattctcgccgatccaaaatca
cgcggaccgcttatttgcaaactcagaaaagagcaggaaatttctctgcgttgcattgcc
aagaagggtatagctaaagaacatgctaagtggtcacctacttcagctgttgcatttgaa
tacgatccatggaacaagttacagcatactgattactggtttgagaatgatgcagatgca
gagtggccaaaaagcaaaaatgccgattgggaagaaccaccgcgggaaggcgaaccattc
aacttccaagaggaaccgcgtcggttttatatggatgtcgaaagtgtcggttctatacca
cccaatgaaataatggttcaaggtttacgaattcttcaggaaaagcttgcagttttagtt
cgtgatctcgacgaagagcagcctactcaactttctgctaacgaactgaatatggaggag
aatgcagaaatgaactggtctccctatcaaaatggtgaagaaaacacgtggtag
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integrated database retrieval system
