Schizosaccharomyces pombe (fission yeast): 2538832
Help
Entry
2538832 CDS
T00076
Symbol
bpb1, SPOM_SPCC962.06C
Name
(RefSeq) zinc finger-splicing factor Bpb1
KO
K13095
splicing factor 1
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
2538832 (bpb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spo03041
]
2538832 (bpb1)
Spliceosome [BR:
spo03041
]
Complex A
Other components
Complex A specific factors
2538832 (bpb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
zf-CCHC
KH_1
zf-CCHC_6
zf-CCHC_3
zf-CCHC_4
Lin-28A-like_zf-CCHC_2
FUR
Motif
Other DBs
NCBI-GeneID:
2538832
NCBI-ProteinID:
NP_587871
PomBase:
SPCC962.06c
SPCC962.06c.1
UniProt:
O74555
LinkDB
All DBs
Position
III:complement(join(556396..558128,558175..558205))
Genome browser
AA seq
587 aa
AA seq
DB search
MLNSRSVGSTGSNNTPLGRRRFDEKPDSLPPLPDANGMSNGYRDSYKSNSRMDHRPDGYH
DGRGRRAYRKHYWGHPTPIEEMLPSQMELETAVKSCMTMEQLELYSLNVRLEEITQKLRT
GDVVPHHRERSPSPPPQYDNHGRRLNTREIRYKKKLEDERHRIIERAMKMVPGFRAPSDY
RRPAKTQEKVYVPVKDYPEINFIGLLIGPRGHTLKDMEAKSGAKIAIRGKGSVKEGKGRS
DPSVRGNMEEDLHCLVTADSEDKINHAIKLIDNVIQTAASVPEGQNDLKRNQLRQLATLN
GTLRDDENQVCQNCGNVGHRRFDCPERINHTMNIVCRHCGSIGHIARDCPVRDQQPPMAD
STADREYQSLMQELGGGSAISNGNGEPQKSIEFSESGAASPQAGHPPPWAAASTSVSSST
SSPAPWAKPASSAAPSNPAPWQQPAAPQSAPALSMNPSSLPPWQQPTQQSAVQPSNLVPS
QNAPFIPGTSAPLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFP
GYPAVPAMPGIPGATAPPGAPGSYNTSESSNLNAPPGVSMPNGYSNR
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgctgaattcaaggtcagtagggtctactggttcgaataatactcccttaggaaggagg
cggtttgacgaaaaaccagattctttaccaccattgcctgatgcaaatggaatgagtaat
ggttatcgcgattcttataaaagcaattccagaatggatcatagaccggatggctatcac
gatggtcgaggtcgtcgagcttatagaaaacattattggggtcatccaaccccgattgag
gaaatgttaccaagccaaatggagctggaaactgccgttaaatcctgtatgactatggag
caattagaattatactctttgaatgttcgattggaagaaattacgcaaaagcttagaacc
ggtgatgttgttcctcatcaccgtgaacggtccccttctcctcctccgcaatacgataac
catggtcgccgattgaatactcgagaaatccgttacaagaaaaagctagaggatgagcgt
caccggattattgagcgcgcaatgaaaatggtgccaggctttcgtgctcccagtgattat
agaagacctgcaaaaacacaagagaaggtttacgttcccgttaaggattatccagagatt
aatttcatcggcctcctgatcggtcctcgtggccacactttgaaggatatggaagcaaaa
tctggagccaaaattgctattcgtggtaaaggaagtgttaaagaaggaaaaggaagaagc
gatccatctgtccgaggtaatatggaagaagatttacactgccttgttaccgcagactct
gaagataaaattaaccatgccataaaactaattgataatgttatccaaacggccgcttct
gttccagaaggccaaaacgacttaaaaagaaatcaacttcgtcagcttgctactcttaat
ggtactttacgagacgatgaaaatcaggtttgccaaaattgcggtaacgtgggtcatcgt
cgtttcgattgtcctgaacgtatcaatcacacaatgaacattgtttgtaggcattgcgga
agtattggccatattgctcgcgactgtcctgttagagatcaacaacctccaatggctgat
tctactgctgatcgggaatatcaaagtcttatgcaagagcttggtgggggatcggctatt
tccaatggtaatggtgaaccccaaaaatctattgaattttccgaaagtggagctgctagt
cctcaagcaggtcaccctccaccttgggctgctgcgtctacttcggtatctagcagcact
tctagtcctgctccttgggccaaaccagcttcatcagccgccccttcaaatccagcccct
tggcagcaacctgctgctccacaatctgcccctgccctttctatgaatccaagttcacta
cctccttggcagcagccaactcaacagtccgctgtacagccttctaatttagtaccttca
caaaatgcgccattcatccctggtacttctgctccccttccacctactacattcgctcct
cctggtgtgcctctgccaccaattcctggggcgcctggtatgccgaacctgaatatgtct
caaccacccatggttccacctggaatggctttgcctcctggcatgcccgcaccatttcct
ggatatcccgctgttcctgctatgcctggtatacctggtgcaacagctccccctggtgca
ccaggctcatacaatacgtcggagtcctctaatttaaatgccccacccggtgtttcaatg
ccaaacggatattccaatcgatag
DBGET
integrated database retrieval system
