Schizosaccharomyces pombe (fission yeast): 2538833
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Entry
2538833 CDS
T00076
Symbol
puf6, SPOM_SPCP1E11.11
Name
(RefSeq) Puf family RNA-binding protein Puf6
KO
K14844
pumilio homology domain family member 6
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spo03019
]
2538833 (puf6)
03009 Ribosome biogenesis [BR:
spo03009
]
2538833 (puf6)
Messenger RNA biogenesis [BR:
spo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
2538833 (puf6)
Ribosome biogenesis [BR:
spo03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
2538833 (puf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF_NOP9
PUF
Motif
Other DBs
NCBI-GeneID:
2538833
NCBI-ProteinID:
NP_588564
PomBase:
SPCP1E11.11
SPCP1E11.11.1
UniProt:
Q9UU76
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All DBs
Position
III:2409922..2411850
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AA seq
642 aa
AA seq
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MAIGKRKESTEVKKKDGSMNKRVKVAKLPKKVDSFSPKKKKNTTSSGSSESDSMSQNDKK
KDSSLNESEDEDFAGFGESASENDELESAESEAENDEESSSQKSNSKESHAQRKKLQKER
KAMKPFADTSLKAKSLWDKLRQKTSIKAEERKTIIAELFDLIRTNVKQLVFKHDMSRVVQ
TCVKFGSKQQRETICAELAGSYVDLCKSPYGKYLAIKIFKYGTPKMKEVILGEMYGNVVK
MIRHREAAYVVEDAFREFTNLQQQRALICEFYGPEFQVFKDRTQDIHIDKLLIDHPEKRP
SIMQNLWKTIEGSIAKGSIGFTMVHRAMLEFINHADSNEAKELLNLTKELIYEFVHTRDG
SQVAMKLFALANAKDRKVMLKSLRPYLIETAKDSYGHLVVVAALDCTDDTIMTGKLLQAE
FEGELLKLSADKFARRILLYVLVGWEDARYFSKENRELLRSLDSLKAKTSKKDPIVRRNE
LKATIGPLLISLISKAAGDMIAESLASQVLVDALLYAPCEKEEAVDATLKAFDGNPEQDN
HLIHQIHCSRALKTLVQNGHWSGAEKQVVKAEDDLKVASKLIVIIKKYLVEWASGDGAFV
VVAVLEALSDSEKQEFLKILRKHKNQLNKSEFRGTKKLLEML
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggctattggcaaaaggaaggaaagcacggaggtaaagaaaaaagatggctcaatgaat
aaacgagtgaaagttgctaaactgcctaaaaaagtggattcgttttcccccaaaaaaaaa
aaaaatactacttcgtcaggatcttcagagtctgattcaatgtcacaaaatgataagaag
aaggactcttcattaaatgaaagtgaagatgaggacttcgcaggttttggtgaatctgca
agtgaaaacgatgaacttgagtccgctgagtcagaggcagagaatgatgaagaatcttca
tctcagaaaagtaattctaaagaatctcatgctcaacgtaaaaaattacagaaagaacgt
aaagctatgaagccgtttgccgacactagcttgaaagccaagtccttatgggataaatta
cgtcaaaaaacttcaattaaagctgaagaacgaaagactattattgctgaactgtttgat
ttaattcgaacgaacgttaagcaacttgtatttaagcatgacatgtctcgtgttgttcaa
acgtgtgtgaaattcggctcaaaacaacaaagagagactatttgtgctgaattagcgggt
agttacgttgatctttgcaaaagtccgtatggtaaatacctagctattaaaatttttaag
tatggtacaccgaaaatgaaagaagtcattttaggagaaatgtatggaaatgttgtgaaa
atgattcgtcaccgtgaggctgcttatgtggtggaagatgctttccgcgaatttaccaat
ttgcagcagcaacgtgcgctgatttgcgaattttatggacctgaatttcaagtatttaaa
gaccgtactcaagacattcacattgataagcttttaattgatcaccctgagaaaaggcca
agtataatgcaaaacttatggaagactattgagggttctattgctaaaggttccattggt
tttacaatggttcatcgtgccatgttggagtttataaaccatgctgattccaacgaggcg
aaagaattattgaatttaaccaaggagttgatttacgaatttgttcatacaagagatggt
tctcaggttgcgatgaaattgtttgctctagctaatgcgaaggatcgtaaggttatgcta
aagagtcttcgaccttatttgattgaaactgcaaaggattcttacggccatttggtagtg
gttgctgctttggattgtactgatgatacaattatgactggtaagcttttacaagccgaa
tttgaaggtgaattattaaaattatccgccgataaatttgctcgcaggattttgttgtat
gttttagtaggctgggaagatgctcgctattttagtaaagagaatcgagaattacttaga
tcacttgattcattaaaagccaaaacgtctaaaaaagaccccattgttcgtcgaaacgag
cttaaggcaacgataggacccttgttaatttcgttaatcagcaaagctgcaggtgacatg
atagctgaatctttagcctctcaagttttggtggatgcattgttgtatgctccatgtgag
aaggaagaagctgtcgatgcaacgttgaaagcttttgatggtaacccagagcaggataac
cacttgattcatcaaattcattgttcgcgcgcgttgaagacattagtccaaaatggacat
tggagtggtgctgagaaacaagttgtaaaagcggaagatgacctgaaggtggcctctaag
ctaattgttatcattaaaaaatatcttgtagagtgggcttctggagacggtgcgtttgtt
gttgtagcagtcctagaggcactcagtgatagtgaaaagcaggagtttttgaaaatatta
cggaaacacaaaaatcagttaaataagtcagagttccgtggaacaaaaaagcttttagaa
atgctttaa
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