Schizosaccharomyces pombe (fission yeast): 2538846
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Entry
2538846 CDS
T00076
Symbol
myo52, SPOM_SPCC1919.10C
Name
(RefSeq) myosin type V
KO
K10357
myosin V
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
2538846 (myo52)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spo03019
]
2538846 (myo52)
04131 Membrane trafficking [BR:
spo04131
]
2538846 (myo52)
03029 Mitochondrial biogenesis [BR:
spo03029
]
2538846 (myo52)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
spo04812
]
2538846 (myo52)
Messenger RNA biogenesis [BR:
spo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
2538846 (myo52)
mRNA cycle factors
P-body specific factors
2538846 (myo52)
Membrane trafficking [BR:
spo04131
]
Others
Actin-binding proteins
Myosins
2538846 (myo52)
Mitochondrial biogenesis [BR:
spo03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
2538846 (myo52)
Cytoskeleton proteins [BR:
spo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
2538846 (myo52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
Myosin_N
NPHP3_N
AAA_22
TsaE
Sigma54_activat
AAA_16
ABC_tran
Motif
Other DBs
NCBI-GeneID:
2538846
NCBI-ProteinID:
NP_588492
PomBase:
SPCC1919.10c
SPCC1919.10c.1
UniProt:
O94477
LinkDB
All DBs
Position
III:complement(join(2225048..2229460,2229535..2229643,2229703..2229731))
Genome browser
AA seq
1516 aa
AA seq
DB search
MTSGIYYKGLQCWIPDEQSQWIPGSIKDCRVEGEKAFLTVQDENENETVITVKPDDLNYE
GRNGLPFLRSINSDADDLTDLSYLNEPSVLDALSTRYNQLQIYTYSGIVLIAVNPFQRLP
NLYTHEIVRAYSEKSRDELDPHLYAIAEDSYKCMNQEHKNQTIIISGESGAGKTVSARYI
MRYFASVQALIQSTDSNFHEAPQLTAVENEILATNPIMEAFGNSKTSRNDNSSRFGKYIQ
ILFDGNATIIGAKIQTYLLERSRLVFQPNQERNYHIFYQILAGSSSEQLEKWKLVENSQE
FNYLKQGNCSTIEGVNDKEEFKATVDALKTVGIDNDTCECIFSLLAALLHIGNIEVKHSR
NDAYIDSKNENLINATSLLGVDPSSLVKWLTKRKIKMASEGILKPLNEFQAVVARDSVAK
FLYASLFDWLVATINKALMYSADKSNQTAKSFIGVLDIYGFEHFKKNSFEQFCINYANEK
LQQEFYRHVFKLEQEEYAAEGLNWSYIDYQDNQQCISMIESRLGILSLLDEECRMPTNSD
ENWVSKLNDAFSKPEFKNSYQKSRFGNKEFTIKHYALDVVYCAEGFIDKNRDTISDELLE
LFTNSDVPFVKDLVLFRLEQTAPPADTKKIKTKPKSNTLGSMFKSSLVSLMSTINETNAH
YIRCIKPNEEKEAWKFDNQMVVSQLRACGVLETIKISCAGFPSRWTFDEFVSRYYMLVPS
AVRTTESLTFSKAILEKHADPTKYQIGKTKIFFRSGVTPLLESARDKALKHAAHLLYEAF
AVNYYRTRFLLSRKRVRSFQAVAHGFLSRRHTEYELLSSNIIKLQSLWRTALKRKEFIQT
KNSILKVQSIIRGFLLRQTLEEKTKHDATLIIQSLWLTFKAHKHYKELQYYAVRIQSLWR
MKLAKRQLTELKIESTKASHLKQVSYRLESRLFEISKQLDNSEQENNKFRERIAELESHL
SNYAEAKLAQERELEQTRVLISDQSQDGELKELLEEKENALIMMEEEMRQVNDANTELLR
VNATLKSQLKNYDMIIVEQTSQLKEKNRIIASLTKATKILNSASSIEQSRNSEEKSRRDS
SLMEMRTQKEMLVLLMNDGLKHDLDKLTEYAGRTFTTLKTLLLKDNDVEAQKLDHLFLAK
LLFIIISQMWKSNLCQESVALVERYCVHTLEYVFQKTSSANERPDIGFWVANTHALLAFV
YTKQQAFKHSSAFTLLSTESHESVQTIFEMIESHLSKIFFEWVRQVNNFLKPLIVQAMII
TGTNTDAGDENRKLRIKFFEKPKYKITDVIHVLNKVHDSCQAYKVNYEIYNALIRSIYRF
INVEAFNSLFIDERGSWKRGTNISYNYHVLKDWCLESGVPEAYLQLEELLQTSKILQFVK
DDPNYVARVRDFYALNFLQIKTLLHRYDYADYEAHVPKKTMSELSKNIVAEGINQREQLT
YEVLDYRLQDSFEESPSLEKIKIPDDCNVTYLRRIIDLASAEESVEQALITVGNVADNDV
QNSSDEENQVPNGIKV
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atgacatcggggatttattacaagggacttcaatgctggattccagatgagcaaagccaa
tggatccctggaagcataaaggattgtcgagttgaaggtgagaaagctttcttaacggta
caagatgaaaacgaaaacgaaactgttattacagtgaagccagacgatttaaattatgaa
ggaagaaacggcctcccgtttcttcgatccattaactcggatgctgatgaccttactgat
ctttcatacctaaatgagccgtcagtgttggatgctttgtcaacaaggtacaaccaactt
caaatttatacgtattctggcattgtccttatcgcagtaaatccttttcagagactgcca
aatttgtacactcacgaaatagtacgtgcttattcggagaaatctcgggatgagctagat
ccccatctctatgctattgctgaagatagctacaagtgcatgaatcaagagcataaaaat
caaactattattatatctggtgagtcaggagcaggaaaaactgtttccgcaagatacata
atgcggtattttgcttctgtgcaagcacttattcaatccaccgattccaattttcatgaa
gctccacaattaactgctgtcgagaatgagatacttgctacaaatccgattatggaggct
tttggtaattctaaaacttctagaaatgacaattcttctcgctttggtaaatatattcaa
attttgttcgacggaaatgctacaatcattggtgctaaaattcaaacttatcttttagaa
agatcaagattagtatttcagcctaatcaagaaagaaattatcatattttctatcagatt
ttagctggttcatcctcggaacaacttgaaaagtggaaacttgttgagaattctcaagaa
tttaattatttaaaacagggaaattgttctacaattgagggcgtcaatgataaagaggaa
tttaaagctacagttgatgcattaaaaacagttggcattgataatgatacatgtgaatgc
atatttagcttattagctgcattgctgcatatcggtaacatagaggttaagcattcaagg
aatgatgcatacattgattcaaaaaacgaaaatctgataaacgctacttcattgttgggc
gtggatccttcttcattggtgaaatggttaacgaagcgtaaaataaagatggcctctgaa
ggtattttgaaaccattgaacgaatttcaagctgtagtagctagagactcagtagcgaaa
ttcctttacgcttcactcttcgactggctggtagctactattaataaagccttgatgtac
tcagctgataaatcgaaccagacggctaaaagttttattggtgttctagatatttatggg
ttcgagcactttaaaaaaaattcatttgaacagttttgcatcaattatgcgaacgaaaaa
cttcaacaggaattttatcgccatgttttcaaactggaacaggaggagtatgctgctgag
ggacttaactggtcctatattgattatcaagacaatcagcaatgtattagcatgattgag
agtcgtttagggattctttcccttttagacgaagaatgccgaatgcccacgaacagcgat
gaaaattgggttagtaagttgaacgatgcattctccaagccagaattcaaaaatagttat
cagaaatcaaggtttggtaacaaggagtttacaattaagcattatgctcttgacgttgtt
tactgtgccgaaggatttattgataaaaaccgtgatacaatatccgatgagttgttggag
ctttttacaaattcagacgttccctttgtcaaggatctggttttattccgtcttgaacaa
actgcacccccagccgataccaaaaaaataaaaaccaagccaaaaagtaatactcttggt
tcaatgtttaaaagctctttggttagtctaatgagtaccatcaacgaaactaatgctcat
tatattcgttgtatcaagccaaatgaagagaaagaagcctggaaatttgataaccaaatg
gtggtttctcagttacgagcatgcggtgttttagaaactataaaaatatcttgtgctggt
tttccctcccgttggacttttgatgagtttgtttctcgttattacatgttggttccctct
gccgtaagaactacggagtctttgacctttagcaaggcaattttagagaaacatgctgat
ccgactaaatatcaaattggcaaaactaaaatattttttcgttcaggtgtgacgcccctt
ttagagagtgcgagagacaaagctttgaaacatgcagcacatcttttgtatgaagcgttt
gctgttaattactataggactcgttttcttctgtctcggaagagagtcaggagctttcaa
gccgttgctcatggtttcttatctcgtcgccatacggagtacgaattactttcttccaat
attattaaacttcagtcactttggagaactgcattaaagagaaaagaattcatacaaacg
aaaaattctatacttaaagtgcaaagtataattagaggctttttattaagacagacttta
gaggaaaagacaaagcatgatgcaacattaattattcaaagtctttggttaacatttaaa
gcccataagcactacaaagaactacaatattatgcagttcgtatccagtctctttggagg
atgaaacttgcaaagcgacaattgacagaattaaaaattgaatccactaaagcgagtcac
cttaagcaagtatcttacaggcttgaaagcagattgtttgagatttcaaaacagttggac
aactcggagcaggaaaataacaagttcagggaaagaatcgctgaattggagtctcatctg
tccaactatgctgaagcaaagttagcacaagaaagagaacttgagcaaactagggtactt
atatcggatcaatctcaagatggggaattaaaggagttacttgaagagaaagaaaacgct
ttgattatgatggaagaggagatgaggcaagtcaacgatgcgaataccgaacttttaaga
gtaaatgcaactttgaagtcgcagcttaaaaattacgatatgattattgttgagcaaacc
tctcagttgaaagagaaaaacaggataattgctagtctgacaaaagccactaaaatactg
aattcggcctctagtatcgaacagtcgcgcaattcggaagagaaatcacgtcgtgatagt
tcattgatggaaatgcgtactcaaaaagagatgcttgtgctattaatgaacgatggcttg
aagcacgatcttgacaaactcacagaatatgcaggtagaacatttacaactcttaaaact
ctattactaaaggacaacgatgttgaggctcagaaacttgatcatttgtttttagcaaaa
ctactttttataataatatcacaaatgtggaaatcaaatctgtgtcaggaaagtgttgcc
ttggttgagcgttactgtgtccacactttagaatacgtatttcaaaagacatcatctgct
aatgagagacctgacatcggattttgggttgcaaatacacatgcgctcttggcttttgtt
tatactaagcagcaggcgtttaaacattcctcggctttcactcttttatccaccgaatct
catgaatcagtgcaaaccatttttgagatgattgaatcacatctgtcaaaaatctttttc
gaatgggttaggcaagtcaataattttttaaagccattgattgttcaggcaatgattatt
actggtacaaatacggatgctggagatgagaatcgaaaactacggattaaattttttgag
aaaccaaaatacaaaatcaccgatgtaatacatgtactaaataaggtgcatgattcttgt
caggcctataaagttaattatgaaatatataatgcattgattagaagcatatatcgattc
attaatgtggaggcattcaattcactttttattgatgaacgtggatcttggaaacgtggt
accaatatttcatacaattatcatgttcttaaggattggtgtctagaaagtggtgttccg
gaagcttatttgcagctcgaagagcttttacaaacctccaagatactacaatttgtgaaa
gatgatccaaattatgtggccagggtccgcgacttttatgctcttaattttctgcaaata
aaaacactcttacatcgttatgactatgctgactacgaggctcatgtaccgaaaaaaact
atgtctgaattgtccaaaaatattgttgctgaaggcatcaatcaaagggaacaacttact
tacgaagtgttggattatagactacaagatagttttgaggaatctccatctcttgaaaaa
ataaagataccagatgattgtaatgttacctatttgcgtcgtatcatcgaccttgctagt
gcagaagaaagtgttgagcaagctttgatcactgtaggcaacgtagccgacaatgatgta
cagaactcgagcgacgaagaaaatcaagtaccaaatggtattaaagtttaa
DBGET
integrated database retrieval system
