Schizosaccharomyces pombe (fission yeast): 2538850
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Entry
2538850 CDS
T00076
Symbol
sec1, SPOM_SPCC584.05
Name
(RefSeq) SNARE-binding protein Sec1
KO
K15292
syntaxin-binding protein 1
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spo04131
]
2538850 (sec1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spo04147
]
2538850 (sec1)
Membrane trafficking [BR:
spo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
2538850 (sec1)
SNARE
SNARE associated proteins
Syntaxin-binding proteins
2538850 (sec1)
Exosome [BR:
spo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
2538850 (sec1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
2538850
NCBI-ProteinID:
NP_588226
PomBase:
SPCC584.05
SPCC584.05.1
UniProt:
O94590
LinkDB
All DBs
Position
III:join(1538207..1538234,1538273..1538313,1538530..1540542)
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AA seq
693 aa
AA seq
DB search
MTLLELQKELFLSKINSVECATKWKVLIVDTKTADIINHFITIHSLLEEKIAAVEILENP
RTPNSSFEALYILHSEEKLVDCILKDEEYDKRYPGIHIVFLDMVKEPLINKLRTSRIASK
IRTVQVAYLDFTSLESRYFQVHDSFSGLRLYHPSNAAIIRQELSKVAHGIFSVCVSLGIS
PNIRCYYPKNAPHASKTMSFILANQLSEIVEEYCSKHPGYHEAASKSTCLIVDRSLDTAA
PFLHEFTYQAMIHDLLPIKNEQYPYEILGPQGTEKRTGKLDDDDLVYTTIRHMHMRDAIE
KLMKDFNQFCIDNTLFLDKERATSLNDMRSMLAGLSDFQELRDQYSLHLTMAQECMNIFE
KQQLNLIGAIEQDLSTGSNVEGKVPRSVLSELLPLLDEGNAEESTKIRLLLLYIIYRDGI
ILQDLFRLFRHSNLSTSREQIFQNLEQLGTRVIKNLTDQSSKRKEVANSLPAGEDVYELS
RYVPTLKVVLENLIQDKLDPELFPYVRNTTPQTEVSMEQTSLRSSRPSWTRSRSMASKLP
REKMLVFVAGGTTFSELRTCYELSDKYNKDIYIGSTVCYSPNEWLDFFSKFQQPREALKF
PEDKPRHIPCLEARPSPNRIQEQPNIDVPSTRYENTSSSDAVSIHKDEKKSKGKSHKLGK
LMMSSKKDKDKSKEKVPTYGTSDKKKKKRFGVF
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgacactgctggagctccaaaaagaattgtttcttagcaaaattaattcagtagaatgt
gctacgaagtggaaagttctaatcgtggataccaaaacagcggacattattaaccatttt
atcactattcacagccttttagaggagaaaattgccgctgtcgaaattttggagaatccg
cgtacccccaattcgtcattcgaagcgttgtatatacttcattcagaggaaaaattagtt
gattgcattctgaaagacgaagaatatgataaaaggtatccaggaatacatatcgtattc
ctagacatggtgaaggagccactaatcaataaattacgaacgtctaggattgcctcaaaa
attcgtacagtccaagtcgcctatttggatttcactagtcttgaatcaagatattttcaa
gtacatgattccttttccggactacgcctttaccatccatctaacgctgcaatcattcgt
caagagctttccaaggttgcgcatggaattttttcagtttgcgtcagccttggcatctcc
cccaacattcgttgttattatccaaaaaatgccccacatgcatccaaaacgatgtccttc
attttagcaaatcaactaagtgaaattgttgaagaatactgttctaaacacccgggatac
catgaagccgcctcaaaatctacttgtctaattgtcgatcgatcattagacactgcagct
cctttcttacacgagtttacgtatcaagctatgattcatgatcttttacctattaagaat
gaacaatatccttatgaaattttgggtcctcaaggtactgagaaacgtactggtaaattg
gatgatgatgatttagtttacacgaccattcgacatatgcacatgagagatgctattgaa
aagctgatgaaagatttcaatcaattttgcatcgacaatactctgtttcttgataaagaa
cgtgccacgtccctgaatgacatgcgtagtatgttggcgggtttatccgattttcaagag
ctcagagatcaatattcattacatctaacaatggctcaggaatgcatgaatatttttgaa
aaacagcaattaaacttgatcggtgctattgaacaagacctttctactggcagcaacgtt
gaaggcaaagtcccccgaagtgtactttctgaactgctacccctattggatgaaggtaat
gcagaagagagtaccaaaattcgccttcttcttttatacattatatatcgtgatggaatc
attttgcaggacctatttcgacttttccgtcatagcaatctatcaacctctcgagaacaa
atatttcaaaacctagagcagcttggaacaagggtgattaaaaacttgactgatcaaagc
agcaagagaaaagaggttgcaaattctcttcccgcaggtgaagatgtttatgaactttca
agatatgttcccactttaaaggtagtcttggaaaatcttatccaagataagttggatcca
gagctttttccgtacgtccgaaataccactccccagacagaagtaagtatggaacagacc
tctctacgtagttcccgaccatcttggactcgatctcgttcaatggcttccaaattaccg
cgagaaaaaatgctcgtttttgttgcgggaggcactactttcagtgaattacgaacctgt
tatgaactttccgataaatataacaaagacatttatattgggagtacagtatgttattct
ccaaatgaatggttggactttttctcaaagttccaacaaccaagagaggcattaaaattt
cctgaagataaacccaggcatataccatgcttagaggctcgccctagtcctaatagaata
caagaacagccaaacattgatgtaccttcgactagatatgaaaatacatcatcttccgac
gctgtttcaattcataaagatgaaaagaaaagtaaaggaaagtcacataagctaggaaag
ctaatgatgagctcaaagaaagacaaagacaaatctaaagaaaaagtacccacttacgga
accagtgataaaaagaaaaagaagcgttttggtgttttctag
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