Schizosaccharomyces pombe (fission yeast): 2538861
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Entry
2538861 CDS
T00076
Symbol
nup97, SPOM_SPCC1620.11
Name
(RefSeq) nuclear pore complex component nup97
KO
K14309
nuclear pore complex protein Nup93
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
2538861 (nup97)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spo03019
]
2538861 (nup97)
Messenger RNA biogenesis [BR:
spo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
2538861 (nup97)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
TPR_CcmH_CycH
Motif
Other DBs
NCBI-GeneID:
2538861
NCBI-ProteinID:
NP_588469
PomBase:
SPCC1620.11
SPCC1620.11.1
UniProt:
O94418
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Position
III:join(2165032..2165225,2165275..2167636)
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AA seq
851 aa
AA seq
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MTVASDDSPKEARGIPFLDQKSRKLANELLEPCLPFIQFNLGEIEQRAKHYLNTVPTSKD
GNTKAHYLLAGSGINAEQTWKKIESLSLQVRPPTTLELSFTDVDMFLKYHREKNVLNSLE
ALVQNTQIAFDQYLEEEWRSKAAKSRPSFDNILLENKKRVSFYPFSVQRSQKFASTLKMC
LEEEALHGFQSKLVSSFCEVAREFAHDTKSLLLYESWKLLSSVILDKDSVTVFGNKGIIS
KAFDIETEDGSVNSRFYQRISDCSRKFLEAQFFEVLNKEIAKTPQAALVGGVPSIRNKIR
AYLNIRLLRNGVWINPDLEIIQDVPIWAFIFYLLRCGFLKEAVDFTEENRDLFEKVAEKF
PFYINAYAKAPNGILPRQLRSQLFSEFNQTIRLQESSDPYKYAVYKIIGRCDLSKTSCPS
ICSVTEDYIWFQLILSREFTEKSVSAHEFFSLEDVQHILLSYGSDYFTNNGSNPVMYFFL
LMLCGLYERAINFLYPYFPTDAVHFAITCAYYGLLRTAPSSSVVSNEPGKIQSMLVETKS
GKPSLEFDRLLIDYTQTCQELSPVMSACYLIPMCKIDKYISMCHKSLCSLVLSTRDYVNL
LGDIRGDGERTPSFLENHRSLIGLSSVKEYLSKITLTAAKQADDQGLLSDAILLYHLAED
YDAAVTVINRRLGSALLRFLDQFVFPDKLISLTKSMMDVYNRNPSLYAKVDYKNRETTNL
LLLTVEAFNAYTNKDYEQALSSLQQLEILPLDPLDSDCETFVVRKLAKEFRFLNENLLQN
VPGIVLIAMNSLKELYAKQKSSSFGNDAISVDKLRLYRQKARRIVMYSFLIEYRMPSQIL
EQLNRCEIEMT
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgacggttgcgtctgacgattcaccaaaggaagctagaggcataccttttttagatcaa
aagtctcgtaaacttgctaatgagttgttggaaccatgtcttccgtttatccagttcaat
ttgggtgagattgaacaacgcgcaaaacattacttgaacaccgttcctactagtaaggat
ggtaatacaaaagcccattatttgcttgctggaagcggtattaatgccgaacaaacatgg
aagaaaattgagtcgctctctctacaagtaagacctcccactactctcgagttgtccttt
accgatgtagatatgtttttgaagtatcatcgagaaaaaaatgttttaaattctttggaa
gcattggtacaaaacacccaaatagcgttcgatcaatatttggaagaggaatggcgttcc
aaagctgcaaaaagcagaccctcctttgataatattttacttgaaaataaaaagagagta
tccttttatcctttctcggtgcaacgttcgcagaagtttgcttccactttaaaaatgtgt
cttgaggaggaagcactgcacggatttcaatcaaagcttgtcagttctttttgtgaggtt
gcaagagaatttgctcatgatacaaagtctcttctcctttacgaatcctggaagttactt
tcctctgttatattggataaggattctgtgacagtgtttggcaataaaggcataatctca
aaagcctttgacattgagactgaggatggctcggttaactctcggttctatcaaaggatt
tctgactgttcccgtaagttccttgaagctcaattttttgaagttttgaataaggaaatt
gcaaaaaccccccaggctgctttggtaggcggtgttccttcaatacgtaacaaaattcga
gcgtatttgaacattcgtctattaaggaacggtgtttggattaatccagatttagaaata
atccaagatgttcctatatgggctttcatattctatctattacgatgtggttttttaaag
gaagcagtggactttactgaagaaaacagagatctttttgaaaaggtggctgagaaattt
cctttttatatcaatgcttatgcgaaggctccgaatggtattttaccaaggcaacttcgg
agtcaattgttttctgagtttaatcaaaccattcgtctacaggaatcttctgatccttat
aagtatgcagtatacaaaataattggacgctgcgacctttctaaaacttcgtgtccatcg
atttgttctgtcactgaagattacatctggttccagttaattttgtcacgtgaatttact
gaaaaaagcgtttccgctcacgaatttttttcattggaagatgttcaacatattttgctt
tcgtatggctccgattattttactaacaacggatctaatcccgttatgtacttctttttg
ttaatgctttgtggtctttacgagcgtgccattaattttttatatccttattttccaacc
gatgcagtccattttgccattacttgcgcatactacggtctgttgcgcactgcaccttct
agctcagttgtcagtaatgaacctggaaagattcaatcaatgctggttgaaacaaaatct
gggaagccttcccttgaattcgatcggttgttaatcgattatacccaaacttgtcaagaa
ttaagtcctgtaatgtctgcctgttatcttataccaatgtgcaaaattgataaatatatc
tcgatgtgtcataaatctctgtgcagtttggtactttctactcgtgattatgttaatctt
cttggcgatatacgtggtgatggcgagaggactccttcctttttggagaatcacaggtct
ttgattggtctttcttctgtaaaagaatacttatcaaaaatcactcttactgctgctaaa
caggctgatgatcagggattattatctgatgccattcttttatatcatttagctgaggat
tacgatgcggcagtaacagttataaatagacggctgggctctgcattgctaaggtttttg
gaccagtttgtttttcccgataaacttatatctttaactaaaagtatgatggatgtatac
aacagaaacccttctttgtatgccaaagtggattacaaaaatcgcgagacgacgaatttg
cttttattgactgtggaggcgttcaatgcatataccaataaagactatgaacaagcttta
tcgtctttacagcagttagaaattttaccccttgacccacttgactcagactgtgaaact
tttgttgtgagaaaacttgcaaaagaatttcgatttctcaatgaaaatttattacaaaac
gtacctggtattgttttaatagccatgaacagccttaaagaactttatgctaaacaaaaa
tcttcatcttttggaaatgacgctatatccgtggataagttacgcctatatagacaaaaa
gcacgaagaattgtcatgtacagtttcctgatagaatatcgtatgccttctcaaattctt
gaacagttaaatcgctgcgaaatagaaatgacatga
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