Schizosaccharomyces pombe (fission yeast): 2538897
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Entry
2538897 CDS
T00076
Symbol
rrp5, SPOM_SPCC1183.07
Name
(RefSeq) U3 snoRNP-associated protein Rrp5
KO
K14792
rRNA biogenesis protein RRP5
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spo03009
]
2538897 (rrp5)
Ribosome biogenesis [BR:
spo03009
]
Eukaryotic type
90S particles
Other 90S particles
2538897 (rrp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
OB_RRP5_4th
HAT_PRP39_C
Spt6_S1
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
2538897
NCBI-ProteinID:
NP_587890
PomBase:
SPCC1183.07
SPCC1183.07.1
UniProt:
O74835
LinkDB
All DBs
Position
III:606337..611409
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AA seq
1690 aa
AA seq
DB search
MAGNKRKRSNASEGSDSQGNERISSLSANEATQDFPRGGASSLTPLEYKEAVLEAKKDFM
ESASGTAELSKKTRPKKKGSKKSSKSELDNEENLKVHIQSLRYKNITPGSLILGQIAQIN
TLDLAVSLPNCLTGYVPITNISDKLSDRLDSIDNHAEDNAATEEEDGLNQIPDLMDLYKV
GQWVRVSVTALGSENTTKTGKRHIELSLKPQDANGSAPEAADFVAGSMIQAVVSSIEDHG
IVFDIGINNYTGFLSKKHINDFPFVEGQSLLCSVISKEDRIFHLSLTATSTKALEVMPSV
QAILPGDYINVLVTDIKESGVIAKYMGVVDVTSDIYHSSPVKGEDLEDKFQLAKSVPARV
LFVIPGDPPKIAVSFLPHVLTFNFATPNTPHPDQLDIGFIVNAAKVTYVSSSLGVFCDVG
VPEISGFAHISRLSDKKVAGISPNSGPYKVDSTHEARIINYSYVDNLYILSFQQSVLNQQ
FLRIEDIEVGQFVDGTIAKLIPQGIVVTISEGINGLVPSTHMADIALQFPERRFKVGSSV
KCRVLSTNVLRKRVLLTLKKSLLNTDLPLIYDYEQATPGTQTVGTLARIFEDGAIVEFYN
SVRAFLPVSEMSEAYIRDAREHFKVGQTLSVTIVSCDPENRKMRVGCREQSWDAKRLERF
ENIKAGSVLSGIVLQKTEDSVIVDLGDKVTGVITLGQLCDGDLNKCSKVMNKLRASTKLA
EVLVLRKDTSKKLISLSLKKSLVEAAKENRMPINITDLKEGIKYFGFVRNATTFGVFVEF
CDGLVALVPKAYISEEYVPVPSAVYKPQQSVTCVCLSVELSQEKAFMSFKPLAQKQEKAV
EFMESKYDIDNPVDETIKKTYDYVAGKITWAVVTSAKASQLNVDLAANVHGRVDVSEVFD
NFGEIVDPNKPLKRFHKGDKIRVRVLGIHDSRNHKFLPISHRVSPKQFLELSVRPSILNM
EPFSMKEPQFKKGDEVTGFVNNVSKECVWVSLTPSVNGRIPILDLTTDVKELNSLQKHFF
LGKAIKCYVVNAEDSITLSAIGPLQGFENLTPGSRLVGKVTNVNEAGAILQLPGHMSGRV
SRIDMFDDYDILPETKFTRNNLVGVCVLSVDVPNRKVALSARNSRTQSQPVEIKDKEINS
VDDLKIGDICRGFVCNVANQGLFVTIGHNLIARVKIGELFDTFIKDWKPHFHVNQLVKGS
IVGIDNDSKRIEMSLKQSKIKDSSEITKTFADIAVGSNLDGTVVKVGDYGVLIRIDGTDN
IVGLCHKSEIADAVVLNISKLYSSGDKVRAHVLDVDSEKRRIALGLKSSYFDSDSDISMS
DNEEDVEMRSEDQSDTSESEVGSKDDVQSEEVENLESAGDEDEEEEPSALQANGFDWTDG
STVFDKLADDTEDSEDEEDEEPKRKKSKSDRFDDEEKDLDEIPSTAADFERQLLSSPNSS
LLWISYMAYHLNLNELQEAREVGKRALSTINYREEDEKLNVWMALLNLEVAYGTEDSLKE
VFKEACAYCDALIVYEKLCGILIKGGKVDLADEYMQLMLKNFKQVPSVWIQYATFLLNND
KAEKAHGLLERSLQSLPKSEHVGIIEKFAILEFKNGDPERGRTIFEGLLSSYPKRLDLWN
VLIDMEMKQDDPSIVRRLFQRLLALNLSTKKAKFAFKKWLAYEKNIGDDEGAEQVKRRAI
EYVSESHSEN
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaataaaagaaagaggagcaatgcctccgaaggctcggattcccaagggaat
gagagaatttcttctttgagtgctaacgaggcaactcaagatttccctcgaggtggggcg
tcttcattgactcctttagagtataaagaagctgttttagaggctaagaaggactttatg
gagtccgcttctggtaccgctgaattgagtaaaaaaactcgtcctaagaaaaagggtagt
aaaaaatcttccaaatccgaattggacaacgaagaaaatttgaaggttcatattcaaagc
ttaagatataaaaatatcacacccggctctttaattttaggtcaaattgctcaaataaat
acgttggacttggccgtctcattaccaaactgtttgacaggttatgtacctatcacaaat
atctccgataagctttctgatcgtctggatagtattgacaatcatgcagaagataatgca
gcaactgaagaggaagacggtcttaatcaaataccggatttgatggatttgtacaaagtt
ggtcaatgggtgcgtgtttctgttacagcccttggctcggaaaatactacaaaaaccgga
aaaagacacatcgagctaagtcttaagccgcaagatgcgaacggttctgctcctgaggct
gcggattttgttgctgggtcgatgatacaggccgtggtttcaagtattgaagatcatggt
attgtttttgatattggtattaataattatactggttttttatccaaaaaacacataaat
gatttcccttttgttgaaggccaaagtttattgtgttccgttatttcaaaagaagatcga
attttccatctttctctcactgcgacatccactaaggcgcttgaggttatgccttctgta
caagctattcttcctggtgactatataaatgttttggtaacggacatcaaggaaagcgga
gttattgcaaaatatatgggtgtagtagatgtcactagtgatatttatcattcttctccc
gtgaaaggggaagatttagaagataaattccagcttgctaaatctgttcctgctcgcgtt
ctttttgtgattcccggtgatccccctaaaattgcagtatctttcttacctcacgtgctt
accttcaacttcgcaactcccaatactccacatcccgatcaactagatattggttttatc
gtcaatgctgctaaggttacgtatgtatcctcctcacttggcgttttttgcgatgttggt
gtacctgagatatccggatttgctcacatttcacgcctttccgataaaaaggttgctgga
attagtcccaattctggcccctataaagttgatagcacccacgaggctcgaatcattaat
tacagttatgttgataatttatatatcttgtcatttcaacaatctgtattaaaccagcag
tttttgcgaatagaggatatcgaagtcggtcaatttgtcgatggtaccattgcgaagctt
atacctcaaggaatcgtggtaactatttcggaaggtataaatggtttagttccctctacc
catatggctgacatagccctacagtttcctgaacgtcgttttaaagttggctcttccgta
aaatgccgtgttttaagtacgaatgttctacgaaagcgtgtcctcttaactctcaaaaaa
tcattacttaacacagatttgccattgatatatgactatgaacaagctaccccaggaaca
caaacagttggaactcttgctcgtatttttgaagatggagctatagttgagttttacaac
agtgtccgtgcttttcttcccgtttcggaaatgagcgaagcttacattcgtgatgctaga
gaacactttaaagttgggcaaacactttctgttactatcgtcagttgtgatccagagaat
cgtaaaatgcgtgtcggctgtcgtgagcagagttgggatgctaaaagacttgaaagattt
gaaaacataaaagcgggttccgtactttcaggtattgttcttcagaaaaccgaagattcc
gtgatcgttgatttaggagacaaggttactggtgtgattacccttggccaactttgcgat
ggagatttaaataaatgctctaaagtcatgaataaattaagagcttctaccaagcttgct
gaggtcttagttcttcgtaaagacaccagtaaaaagttgatttccttgtcattgaagaaa
agccttgttgaagctgccaaggaaaatcggatgcccatcaatatcactgatcttaaagaa
ggtattaaatattttggattcgtgcgtaatgcgactacatttggcgtttttgtcgagttt
tgtgacggtttagtagcattagttccaaaggcctatatatctgaagagtatgtgccagtc
ccttcagcagtctataaaccccagcaatccgttacctgtgtgtgtttgtccgtagagctt
tcacaagaaaaggcgtttatgtcatttaagcctcttgcgcagaaacaggagaaagctgtg
gaatttatggaaagcaagtacgatatcgacaatccagtcgatgaaactattaaaaagacg
tatgactacgttgcaggaaaaattacctgggctgttgttacatctgctaaagcttctcag
cttaatgttgatttagctgctaatgtgcatggccgtgttgatgtttctgaggtttttgat
aattttggagagattgttgatcccaataaaccacttaaaagatttcataaaggtgataaa
attcgagttcgcgtcttaggtattcacgactcaagaaatcataaatttttaccgatatcg
catagagtgtctccgaagcagtttttagagttgagcgtacgcccttcaatattgaacatg
gagccattcagtatgaaagaacctcagttcaaaaagggtgatgaggtgactggttttgtc
aacaacgtctctaaggagtgcgtttgggtttctcttactccttctgtcaatggtcgtata
cctatcttggatctaacgacagacgttaaagaattgaattctttacaaaagcattttttc
cttggaaaggcaatcaagtgttatgttgttaatgccgaagactctattactctatcagca
attggaccattacagggatttgaaaacttgacccccggaagtagacttgttggcaaagtg
acaaatgtcaacgaagctggtgctattttgcaacttcctggtcatatgtctggtagagtt
tctcgaattgatatgtttgacgattacgatattttacccgaaactaaatttacccgcaat
aatttggtaggtgtctgtgtcttaagtgtggatgtacctaatagaaaagtggccttatct
gctcgtaattctcgtactcaatcgcagcctgtggaaatcaaggacaaggaaataaattcc
gtagatgatctcaagattggtgatatatgtcggggatttgtttgcaatgttgctaaccaa
ggcctctttgttacgataggacataatctgattgctcgagtaaaaataggcgaattgttc
gatacattcattaaggattggaagccccattttcacgtcaaccaactagttaagggaagc
atcgttggaatcgacaatgattccaagcgtattgaaatgtcattgaaacaaagcaaaatc
aaggattcctcggaaatcacgaagacatttgctgatatagccgtcggtagtaatcttgat
ggaactgtcgtcaaagttggtgactacggtgttcttattcgtattgatggaaccgacaat
attgttggattatgccataagtccgaaattgccgatgcagttgtactgaatatcagtaaa
ttgtatagttctggtgacaaagtccgtgcacatgtcttagacgttgattctgaaaaacgc
cgaattgctttagggcttaagtcttcctattttgattcggattccgacatttcaatgtct
gacaatgaggaggacgttgaaatgagatcagaggatcaatcagatacatccgaatctgaa
gtcggctcgaaggatgatgtccaatctgaagaggtagaaaatctggaatctgctggtgat
gaggatgaagaggaggagccaagtgctcttcaagccaacggatttgactggaccgatgga
agtactgtttttgataagttggctgatgatactgaagatagtgaggatgaagaagatgag
gaaccaaagcgtaagaagagtaaatctgatcgttttgacgatgaagaaaaggatttggat
gaaattccaagcacagcagctgattttgaacgacagcttctctcttcacctaattcctca
ctgttatggattagttacatggcgtatcatttaaatcttaatgagttgcaagaagccaga
gaagttggaaagcgtgctctttccacgattaactatcgggaggaagatgaaaaactcaac
gtttggatggccttgcttaacttggaggttgcatatggtactgaagattctttgaaggaa
gtttttaaggaagcatgcgcttattgcgatgccttaattgtttatgaaaagctttgtgga
attttaattaaaggtggtaaagttgatttagccgatgagtatatgcaattaatgttgaag
aactttaaacaagttccatctgtctggattcaatatgccacttttctgttgaacaatgat
aaagcagaaaaagcccatggtcttttggaacgcagtctccaaagccttcccaaaagtgaa
cacgttggcatcattgagaaatttgccattcttgaatttaaaaatggtgatccagaacgt
ggacgaacaatttttgaaggtcttttaagtagttatcctaaacgtttagacctttggaat
gtgcttattgatatggagatgaagcaagatgacccatctattgtgcgtagactattccaa
agattactagcgttaaacctttctacaaagaaagctaaatttgcgttcaagaaatggcta
gcttacgagaaaaacatcggtgatgatgaaggtgcagagcaagttaagcgtcgtgcaatc
gaatacgtttctgagagccattctgaaaattga
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