Schizosaccharomyces pombe (fission yeast): 2538909
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Entry
2538909 CDS
T00076
Symbol
bdp1, SPOM_SPCC1919.14C
Name
(RefSeq) transcription factor TFIIIB complex subunit Bdp1
KO
K15198
transcription factor TFIIIB component B''
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spo03021
]
2538909 (bdp1)
Transcription machinery [BR:
spo03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
2538909 (bdp1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
2538909
NCBI-ProteinID:
NP_588496
PomBase:
SPCC1919.14c
SPCC1919.14c.1
UniProt:
O94481
LinkDB
All DBs
Position
III:complement(join(2237547..2237788,2237833..2237980,2238019..2238668,2238719..2239210,2239256..2239286))
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AA seq
520 aa
AA seq
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MSSQILTSPTKKSMSRFAPKFTARREKVSDQKEVVHEEKNQPLTGNEVETSAQLSRDTAN
ADISSPVVQTVVHKEATENPTASSYRKDDSVKQNEKLLHSNPTFKISKPTVLEQPLNAIE
HLSPETDLSSSAEQQFMKELDLFFDENIPLSQLSAVSDGKADSPATKKSRRSYRESSLKR
KSQLILENVGTDEKIINISETKMSALCDDPGIGRKSQRFIELEKMLFEEKRAKRIKKQGA
STASSSREASLDSTIKQPLSASLLESSEPKEKEEIVGSLEEEGTDESASLEDSLSHPTKS
ILDQLADKMEVDGLNNNSNYSATPRTRVVNGQIVLDETSLEVDRHERDFVPAEEREYVEE
NSLSRRVTSATWGNRQKPEKWNAMDTEKFYKALSQWGTDFALIANMFPTRNRRQIKLKFK
QEERRNPARVNQALKIKKPIDMEEYSKVSGKVFRPVEEMEKELQKIRENFEEERRRAIEV
AEQRQLIVNHELEQEKNAPSPTDDKSYVFEDGVEVVGQVV
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgcaaatattaacctcacctacaaaaaaatcaatgtcaaggtttgcccctaaa
tttacagcccgtagagagaaagtatcggaccaaaaagaggttgttcatgaagaaaaaaat
caacccctcacaggaaacgaagtagaaacatccgctcagctgtctcgtgatactgccaat
gctgatatttctagtccggttgtgcaaacagtagttcacaaagaggcaactgaaaatccc
acagcttcatcctatagaaaagatgattcagtgaaacaaaatgaaaaacttttgcattca
aatcctacttttaaaatttctaagccaacggttcttgagcagccgttaaatgctattgag
catttgtcgcctgaaaccgatttatcctcttcagccgaacagcaatttatgaaggaatta
gatttgttttttgatgagaacattcccctttctcagctcagtgctgttagtgacggaaag
gcggattctccggctacaaaaaagtctcgccgttcatatagagaatcttctttgaaaaga
aaaagtcaattgatattggaaaacgtgggtaccgacgagaaaatcattaacataagtgaa
accaaaatgtctgctttatgtgatgatcctggaattggccgcaaaagtcaacgatttatc
gaattagaaaaaatgctttttgaggaaaaacgagcaaagaggattaaaaaacaaggagca
agtactgcaagctctagtcgagaagcgtctttagattctaccatcaaacagcctttgagt
gccagtcttctagaatcaagcgaaccgaaagagaaagaagaaatagtaggaagtttggaa
gaagagggtacggatgagtctgcttctctcgaagatagtctctctcacccaacaaagtct
attcttgatcagttagcagataaaatggaagttgatggtttgaataacaactccaattac
tctgcaactcctcgtacgcgagttgttaatggccaaattgttctggatgaaacctcacta
gaagtcgaccgtcatgaacgtgattttgtaccagcagaggaacgcgaatacgttgaagaa
aattctttaagtcgtcgggttacaagtgctacttggggaaataggcagaaacctgagaaa
tggaacgctatggatactgaaaaattttataaggctctatcacagtggggaactgatttt
gctttaattgctaatatgtttccaactcgtaatcgtcgacagataaaactaaagtttaaa
caagaagaaagaagaaatcctgcacgtgttaatcaagctttgaaaattaaaaaacctatt
gatatggaagaatatagtaaagtttcaggaaaggtgtttcgtccggttgaagaaatggag
aaagaattgcaaaaaattcgtgaaaattttgaagaggaaagacgtcgcgcaattgaagtt
gcagaacaaagacagctcatcgtcaaccatgagctagagcaagaaaagaatgcgccttct
ccaaccgacgataagtcttatgtatttgaggacggagtcgaggtagtcgggcaagtggtt
taa
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