Schizosaccharomyces pombe (fission yeast): 2538928
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Entry
2538928 CDS
T00076
Symbol
SPOM_SPCC18.03
Name
(RefSeq) shuttle craft like transcriptional regulator
KO
K12236
transcriptional repressor NF-X1
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spo03000
]
2538928 (SPOM_SPCC18.03)
04121 Ubiquitin system [BR:
spo04121
]
2538928 (SPOM_SPCC18.03)
Transcription factors [BR:
spo03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
2538928 (SPOM_SPCC18.03)
Ubiquitin system [BR:
spo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
2538928 (SPOM_SPCC18.03)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
2538928
NCBI-ProteinID:
NP_588382
PomBase:
SPCC18.03
SPCC18.03.1
UniProt:
O74853
LinkDB
All DBs
Position
III:1955764..1958997
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AA seq
1077 aa
AA seq
DB search
METSKNPSDLPKKPANVKKNRRRFQKSQKKSISPSSGSELPNFKTTISQNNEEVKTSLKE
DSSKFHPSASAPIFVPTSSVQLNVSKNNGHKASDIVDAVSSKDEELRKHAKGEGKRSKNR
KRSSKHSEKQAVDLKSSNSSQETSSSKGSVNNKSERSREAKSRMPKNSKEIKKGLDLSKL
DMTSRMIVELKNRLYECSVCTDTINPSTSIWSCGTCYHVFHLSCIRKWCKNSIEQRNEDA
WRCPYCQSNQTETSLHYLCWCGKQEKPEFVKNLVPHSCGDPCGKTRGQDCEHPCPLLCHP
GPCPPCTATVEKFCLCGKESIHARCSNISKVNTEPFRCENVCDELLPCGEHTCKKRCHSG
LCGACFEPINAKCYCGLHSKTYPCSSLPSPSISKKDENGSVKEWFGYYSCNNPCTLFFDC
GLHKCSKTCHPISETRAHCPFATDVLTKCPCGKEDISFLLKGHERKSCSDPIPTCENICG
KLLSCGHRCKYKCHLGSCGTCSETLTIPCRCTANEVQVTCEQLQNGFIPTCERLCTILLS
CGRHQCNKKCCSGYSKAQTRLARRPKGAKLRYHLLTEEFEEEHICFRPCNKKLSCGNHFC
QHMCHRGPCPRCLEASFEELPCTCGRTRLYPPVACGTPIPDCPYLCVLPKSCHHPQVKHN
CHPTSEPCPPCPYFVKKRCLCGKHILENQPCYRENVRCGELCNKLLSCKTHFCEKLCHPD
GECESSCKKECGKRRMYCEHVCQSPCHAGHPCDERIPCKAPLEVSCECGRIRKKVTCDAS
YDNPDPQHKVSCTLECSQQQRNKLFAEALNIKTDRRSNDVAQYTKSLLVFYGKHSDFADE
VESLLRNFVNNKASSFRFPSMRREQRAFVHMFAKLLGLESVSFDPEPKRNVMVYNKGEAK
LPNMLLKEANLYHLQHPEIPLKPDSLLGPEEENATASHIDGSSNASDSGYNAFVLKELLK
EVNDESAIFSVLDDIVDFNHLTWSILFGENYIILKPLNTDLIVNKTGKLVALRPLVNRRL
ADAGIASRCEICEINDKNEIVKTRSQRIHSKKKAFLSLVPDKSIGVINRYKELATEL
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggaaacatctaaaaatccttccgatttgcctaaaaaacctgcaaatgtaaaaaaaaat
agacgaaggtttcaaaaatcacaaaagaaatcgatatcaccttcttcaggttcagaatta
ccaaattttaaaacaaccatatcccaaaacaatgaagaggtaaagacttcattaaaggaa
gattccagcaagttccatccttctgcgagtgcaccaatctttgtccccacttcctccgtt
caattaaacgtatctaagaataatggacacaaagcgtctgatatcgtagatgctgtttca
tctaaggatgaagaattgcgaaagcatgcaaagggagaagggaaaagatctaaaaatcga
aaaagatcttctaagcattctgaaaaacaggcagttgacttgaagtcttctaactctagt
caagaaacctctagtagcaaaggttctgttaacaataaaagcgagaggtcacgggaagcg
aagagtcggatgccaaaaaattcgaaagaaataaaaaaaggattggacctttctaaatta
gatatgacctctaggatgatagtggaattgaagaacagactttatgagtgtagcgtctgt
accgataccattaacccttctacatcgatctggtcctgtggtacttgctaccatgttttc
catctatcttgtattcgtaaatggtgtaaaaactcaatcgaacaaagaaatgaagacgct
tggcgttgtccttattgtcaaagtaatcaaacggaaacttctcttcattatctctgttgg
tgcggaaaacaggagaagcctgagtttgtcaaaaacttggtaccacattcctgcggtgat
ccctgtggtaaaactagaggtcaagattgcgaacacccttgtcccttgctttgtcatcct
ggaccttgccctccttgtaccgctactgtggaaaagttttgcctttgtggcaaggaaagt
atacatgctcgatgttcgaatatttcaaaagtaaatacggaaccttttcgttgcgaaaat
gtatgtgatgagctattgccttgtggtgaacatacatgcaagaagcggtgtcattcaggc
ttatgcggtgcatgttttgaacctataaacgctaagtgctattgtggtttacattcaaaa
acttatccttgttcatctttaccatctccttccataagcaaaaaagatgagaatggttct
gtgaaggagtggtttggttactactcgtgcaataacccctgtactttattttttgattgt
ggtcttcataaatgtagtaaaacatgtcacccaatctctgaaacaagggctcattgtcct
ttcgctaccgatgtattgacaaaatgcccttgtggaaaggaagatatatcttttctgctt
aagggacatgagaggaaaagctgttctgatcctatccccacttgtgagaacatttgtgga
aagcttctgtcttgtggccatagatgcaaatataaatgtcatcttggttcatgtggtact
tgttcggaaacactgaccattccatgtagatgcactgctaacgaagtgcaagttacatgt
gagcagttacaaaatggatttattcctacctgtgaacgactgtgtacgattcttcttagt
tgtggacgtcaccaatgtaataaaaaatgttgttctggttattcaaaggcacaaacacgg
ttagcacgccgccctaaaggtgctaaattgagatatcatcttcttactgaggaatttgaa
gaagagcatatttgttttcggccttgcaacaaaaagctttcgtgtggtaatcacttttgt
cagcatatgtgtcatcgcggtccctgtcctcgatgtttggaggcttcctttgaggagctt
ccgtgtacttgtggacgtacaagattatatccgccagtggcctgtggtacgccgattccc
gattgtccttacctttgtgttcttccaaaatcttgccatcaccctcaggtcaagcataat
tgccatcctacctcggaaccttgtcctccttgtccttattttgttaaaaagcgttgtctt
tgtggcaaacatattttagaaaatcaaccttgttatagagaaaacgttagatgtggggag
ctctgtaataaacttctatcctgtaaaactcacttttgcgaaaagctttgtcatcctgat
ggtgaatgtgagtcaagttgcaaaaaagagtgcggaaaaaggagaatgtattgtgagcat
gtatgccaatctccctgccatgctggtcatccatgtgatgagcggattccatgcaaggca
cctcttgaagtctcgtgtgaatgcggccgtattagaaaaaaagtcacttgtgatgcatca
tatgataacccagatcctcagcataaagtgtcttgtacgcttgagtgttcccagcaacaa
cgaaataaactttttgcagaggcgttgaacattaaaactgatcggcggtccaacgatgta
gctcaatatacaaagagtctacttgtattttatggaaaacattctgattttgctgatgaa
gttgagtcgttacttcgcaactttgttaacaataaagcgtcttccttccgttttccatcc
atgcgtcgtgaacaaagagcatttgtacatatgttcgcaaagttgttgggtttagaaagt
gtttcgtttgaccctgaacctaaacgaaatgtcatggtctacaataaaggagaggctaag
ttgcccaatatgttgcttaaggaagccaatttgtaccacctgcaacatcctgaaattcca
ttaaagccggacagtctattaggacctgaggaggaaaacgccactgcaagccatatagac
ggttcatcaaatgctagtgattcgggatataatgcttttgtcttgaaagaattattgaaa
gaagtaaatgatgaatctgccattttttcggttttagacgacattgtggattttaaccac
ttgacctggtctattctttttggcgaaaattatattatactaaaaccattaaacacagat
ctcattgtcaataaaactggcaaactagtggccttgcgtcctcttgtaaatcgacgtctt
gcagacgcaggaattgcaagtcgctgtgagatctgtgaaataaacgacaaaaacgaaatt
gttaaaacacgctctcagagaattcactcaaaaaagaaagcctttttaagtcttgttcct
gataaatctattggggttattaatcgatataaggaacttgctactgaattgtag
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