Schizosaccharomyces pombe (fission yeast): 2538936
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Entry
2538936 CDS
T00076
Symbol
prp11, SPOM_SPCC10H11.01
Name
(RefSeq) ATP-dependent RNA helicase Prp11
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
2538936 (prp11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spo03041
]
2538936 (prp11)
Enzymes [BR:
spo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
2538936 (prp11)
Spliceosome [BR:
spo03041
]
Complex A
U2 snRNP components
U2 related factors
2538936 (prp11)
Complex B
2538936 (prp11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
CdAMP_rec
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
2538936
NCBI-ProteinID:
NP_587856
PomBase:
SPCC10H11.01
SPCC10H11.01.1
UniProt:
Q9P7C7
LinkDB
All DBs
Position
III:519540..522584
Genome browser
AA seq
1014 aa
AA seq
DB search
MSRRTRSRSPPRRSYNRERRDYRKYDDSEDQKGARYNRYVDDVSSRRDRHDSFRSHESNK
IRRDNSWKHDKYSYEKRYQERDREYARSKNIPDQYIGRSPRPTSHRHAEEKEVDNKTKSD
ETNPVLQGSATEIKPQPRRSRFDRTERVGASLSVSEIQSENPRVDVIPKDKAVENNHQRN
AEKPVASDKITDAKLLARLERVRAWKESKAKQEASKKEEHKLNTKPQVTAKDQNAMPSTG
ISGFEINRQKDTSDMKRNNRVHMDDEDGPRRMNLEDYQELWDQEDRGMLGNEQAASMEED
EVDPLDAYMASLVGTTDTIRPGLLNTEVIDPNANDDERMVISETLEEEENLLALAAKRSK
KKDVITVDHSKINYEDFKKDFYVEPEELKNLSPAEVDELRASLDGIKIRGIDCPKPVTSW
SQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIAFLLPMFRHI
KDQRPLKTGEGPIAIIMTPTRELAVQIFRECKPFLKLLNIRACCAYGGAPIKDQIADLKR
GAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMRIINNIRPDR
QTVLFSATFPRAMEALARKVLKKPVEITVGGRSVVASEVEQIVEVRPEESKFSRLLELLG
ELYNNQLDVRTLVFVDRQESADALLSDLMKRGYTSNSIHGGKDQHDRDSTISDYKAGVFD
VLIATSVVARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAVTFITPEQEKYA
VDIAKALKMSKQPVPKELQTLASQFLEKVKAGKEKAAGGGFGGKGLSRLDETRNAERKMQ
RKAYGEDEEDVETEAEAKSPLEKITPEKSTGDPTLDRVRAAVGGIAARAFANQTAQSNKL
TQPISIIKTDGDEYKAKMEINDYPQQARWAVTNNTNIVHVTELTGTSITTKGNFYLPGKN
PEPGEEKLYLWIEGPSELVVNRAITELRRLLLEGINHSLEGGNKPSASGRYTVV
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgtctagaagaacacgatcaaggtcgcctccaaggcgatcctacaatagagaaagaaga
gattaccgaaaatatgatgactctgaagatcaaaagggtgcacggtataaccgatacgta
gacgatgtatcaagtcgacgagataggcatgattcttttcgttctcacgagtctaataaa
attagaagagataattcttggaagcatgataagtatagttacgaaaaaaggtatcaagag
cgagatcgagagtatgcgagatcaaagaatattcccgatcagtatattggtaggtcaccg
cgaccaacatctcatagacatgctgaggaaaaagaagtagacaataaaactaaatcagat
gaaacaaatcctgtattacaaggttccgcaactgaaataaagcctcagcctagacgttct
cgatttgatcgaactgagagagttggtgcttctttaagtgtttcagaaattcaatctgaa
aatccacgagttgatgtaattcccaaggataaagctgttgaaaataatcatcaacgaaat
gctgaaaagccagtagcgtcagacaaaattacggatgctaagctactcgccaggctagaa
cgagttagagcgtggaaagagtcaaaggcaaaacaggaggcttccaagaaggaggagcac
aagttgaatacaaagccgcaggttacagccaaagaccagaatgctatgccttcaactggt
atatccgggtttgagattaatcgccaaaaagatacttcggatatgaagcgaaataaccga
gttcacatggatgatgaagatggtcctaggcgtatgaatcttgaagactaccaggagctt
tgggaccaagaagaccggggtatgctaggaaatgagcaagcagctagcatggaggaagac
gaagtagatcctttagatgcttacatggcctctttggttggtaccactgataccataagg
cctggtttattaaatacggaggtcattgatccgaatgcaaacgatgacgagcgcatggta
atttcagagactttggaagaggaagaaaatttacttgctcttgctgcaaaacgatcaaaa
aagaaagacgtaatcacagttgatcactcaaaaataaattatgaagatttcaaaaaggat
ttctatgttgaacctgaagagctcaaaaatctgtcaccagctgaagttgatgaactacgg
gcttctttagatggtattaaaattcgtggtattgattgcccgaagccagttactagttgg
agtcaatgtggtttatctgcccaaaccataagcgtgatcaattccttgggatacgaaaaa
ccaacctctattcaagcacaagcaattccagcgattacttctggcagagatgtaattggc
gtagctaaaacaggaagtggaaaaaccattgcttttcttcttcctatgtttcgacacatc
aaagatcagcgcccattaaaaacaggagagggtcctattgcaataataatgactcctact
cgtgaattggctgtgcaaatttttcgcgaatgtaaacctttcttaaagttattgaacatt
cgtgcgtgttgtgcatatggaggtgcccctattaaagaccaaattgctgatttaaaacgc
ggtgcagaaatcgtagtttgtactcctggacgtatgattgatgttttaagtgcgaatgca
ggacgtgttactaacttacaccgctgcacttatttggttttggatgaggccgatcgtatg
tttgatttaggatttgaaccgcaagtcatgagaattattaacaatattcgacctgatcgg
caaaccgtactattttcagctacctttcctcgtgctatggaagcccttgcaaggaaagtt
ttaaagaaacctgtagagattacggttggcggacggtcggttgttgcttctgaggttgag
caaatcgttgaagtacggcctgaggaaagcaagttttctcggctattagagctgttaggt
gagttgtacaacaatcaacttgatgtacgtacacttgtttttgtggatagacaagagtct
gcggatgcacttttgtcggaccttatgaaacgcgggtatacaagtaattcaattcatggc
ggtaaggatcaacacgatcgcgactcaaccatcagtgattataaagcaggagtatttgat
gtattaatcgcaactagtgtagttgctcgtgggcttgacgttaaatctttacagctggtg
gtaaattatgattgccctaatcatatggaggattacgtgcatcgtgttggtcgtacaggc
cgtgctggccatactggtgtagctgttacctttataaccccagaacaggaaaagtacgcc
gtagacattgccaaggctttaaagatgagtaaacaaccagttccaaaagaactacaaact
cttgcttcccaattcctcgagaaagttaaggctggtaaagagaaagcagcgggtggaggt
tttggcggcaaagggttatcacgactggatgaaactcgaaatgctgagcgtaaaatgcag
cgtaaggcctatggtgaggacgaggaagatgtagagactgaagctgaagcaaaaagcccg
ttggaaaagattactcctgaaaaatctaccggtgatcccacgctcgatagagttcgtgct
gctgtgggtggaattgctgctcgtgcatttgccaaccaaactgcacaatctaacaagctt
actcagccaatttctataataaaaaccgatggtgatgagtataaagctaaaatggaaatt
aatgactatcctcaacaagctcgttgggccgttactaataacacaaatattgtacatgta
acggagttaactggcacaagtatcactactaagggtaatttctacttgccaggtaaaaac
cctgaaccaggagaggaaaagttgtacttgtggattgaaggtccatctgagcttgttgtt
aaccgagccatcactgaattgagacggcttcttcttgaaggaattaaccacagtttggaa
ggaggtaacaaaccaagtgcttctggacgatacacagttgtctag
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