Schizosaccharomyces pombe (fission yeast): 2539180
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Entry
2539180 CDS
T00076
Symbol
sts5, SPOM_SPCC16C4.09
Name
(RefSeq) Dis3L2-like 3'-5'-exoribonuclease
KO
K18748
protein SSD1
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spo03019
]
2539180 (sts5)
Messenger RNA biogenesis [BR:
spo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
2539180 (sts5)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
Dis3l2_C_term
Rrp44_CSD1
CMV_1a
Motif
Other DBs
NCBI-GeneID:
2539180
NCBI-ProteinID:
NP_587919
PomBase:
SPCC16C4.09
SPCC16C4.09.1
UniProt:
O74454
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All DBs
Position
III:680362..683562
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AA seq
1066 aa
AA seq
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MDEEFENDFPYKVMLNQQQDPSDAQSSPTFVPSANPSLTTPWLQTTPSANRPTWLPLQQH
MHQLRHTGLLPAVESSFVHGHRRSASAGVGMGNFSNQATIPSNSPAVSNMQPPTQGGQPL
YPTNFFTTSVSASSDSFPNSPTVPSKFSLNPSVATSTNISPRRHAKSHSVASVSSPNSHN
AVPFTPHAFVPPVNNASPLPALNTLPQLLRPRNLDAQWRPSSLSQTNSPTHAANPSFPGT
IVTHNTSNFRPEGGGHRHRRSTGSLSVGSSGSGFSSGGSGNPRKNLFSPYLPQSSIPALL
AERRLVTGILIVSKKNRSDAFVSVDGLDAEVFICGSKDRNRALEGDVVAIELLDVDEVWA
GKLEKEENRRRKDPISTRGSFDNLRIDAVPFEVPQRSAIKARDDEQVEGQTLFLLDQKQL
GADEKPKYAGHVVAVLQRAPGQVFSGTLGILRPSSAANKERQTSSGNQGSSNNSGNDKPK
IVWFKPSDKRVPLIAIPTEQAPTDFLGNDQAYAQRLFLASIKRWPVTSLHPFGMLVGELG
SMDSMSAQVSALLHDTGVHSEPWEGSAATSAVTALNALSDNFLNVAGCADYRSEDVFLFV
KNDVSKAAVSEVKQHESNINSSSATDFVSSAFHIRPTSTGYHVGIHVTDVSRVIEPGSPL
DRELQRRSIAVNLCQKSVPLFPTTLGEALSLREDKDCYTMSLLLDVSSTGKIRGTWIGWA
VIRPRKAYTMKEADELLQTDARLRLFHTVSSRLRTHHLGTDVPLSRYCRLVRRWDEESCS
FDPNETNLFISSAVEVLRETLLDAANRAVASHLRQEFRENAFLRTQRLPSRENCRILQSM
AIQMGCVLDLSSTKSLLRSLSLIEDDTVRNILQLYYYKVTPRAVYEMQKYKGNLASQMMS
LGIEDESDDLTHFTAPLERYGDIVVHYQLQLLLRGELASEKRLRVWSQAANDASRRLVIS
KFAQETSIHIKIFSDWAESQVWQDGLVCFVAPSYFDVFFPSLGMEKRVHLDLLNLTHVRF
EEDQGILSLYDESGAVTVVKLLTSVKVKLFVQLSTPPLINVSNVEF
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggagtttgaaaatgactttccttacaaggtgatgcttaatcagcaacaggat
ccttctgatgcgcaatcgagtcctacatttgttccttctgcaaacccttccctcaccact
ccttggttacaaaccactccctctgctaatcgccccacatggctaccgttacagcagcac
atgcatcagcttcgacacactggtcttttacccgccgttgaatcgtcctttgttcatggc
catcgtcgaagtgctagtgctggcgttggtatgggcaatttttccaaccaagccactatt
ccttctaattctccagccgtttctaatatgcaaccaccgactcaaggcggtcaaccctta
taccctactaatttcttcaccacttcggtctctgcctcttcagattccttccctaacagt
ccgaccgttccttcaaagtttagcttaaatccatcagttgctacatctacgaacattagt
ccaaggcggcatgcaaaaagccatagtgttgcttctgtttcctctcccaattcccataac
gccgtaccgtttactccccatgcgttcgttcctccagtcaacaacgcatctcctttacca
gccttgaacactttaccacaattattgcgccctcgtaatttggatgctcaatggcgtcct
tcatcactttctcaaacgaatagtcctactcatgccgcgaatccatcttttcctgggact
attgtaactcataatacctcaaactttcgtcctgaaggcggtggtcatcgtcatcgtcga
tcgactggcagcttaagtgttggctcctctggctctggtttttcttcgggaggttcaggt
aatccccgtaaaaatcttttttctccttatttaccacagtcatcgattcctgctctactc
gctgagcgtcgtttggtaacgggtattttaattgtaagtaagaaaaatagatcagacgct
tttgttagtgtcgatggtttggatgcggaagtattcatatgtggttcgaaagatcgcaat
cgtgcccttgagggtgatgtcgttgccatagagctgttagacgttgacgaggtatgggct
ggtaaacttgaaaaggaagagaatcgaaggcgtaaagacccaatttctactagaggctct
tttgacaaccttcgaattgacgccgtaccgtttgaggttcctcagaggtctgctataaaa
gcaagagatgatgaacaagtggaagggcagaccctgttccttcttgaccaaaagcagctt
ggtgcggacgaaaagccaaagtatgctggtcatgtcgtagcagtcttgcagagggcgcca
ggccaggtattttctggtacgcttggcatacttcggccaagtagtgccgctaataaggag
aggcagacctcgtcgggtaatcaaggctcttccaataactcgggaaatgacaagcccaaa
atcgtatggtttaagccatctgataaacgtgtgcctttgattgcaattcctactgaacaa
gcacccacagactttttgggtaacgatcaagcatatgctcaacgattgtttttagcttct
ataaagcgttggcctgtaacttctctacatccttttggtatgttggttggtgaattagga
tctatggactctatgtctgctcaagtatccgctttattacacgatacgggtgttcatagt
gaaccatgggaaggatccgccgctacatccgccgtaactgcactcaatgctttatcggat
aattttttaaacgttgctggttgtgcagattatcgatctgaagatgtctttttatttgtt
aaaaatgacgttagcaaagcagccgtttcagaagtcaagcaacatgaatcaaacatcaat
tctagttctgctactgatttcgtttcttctgcctttcatattcgaccaacttcaactggt
tatcatgtaggaatccatgttactgacgtttctcgtgttattgagccaggatccccatta
gatcgcgaattacagcgaagaagtattgcggtgaatctttgccaaaagtcggttcctttg
tttcccactacgttaggtgaggctttatctttacgagaagataaggattgttatacaatg
tctctcttactggatgtttcctcaactggtaaaattcgtggcacttggattggatgggct
gtcattcgtcctcgcaaggcatataccatgaaggaagctgatgagttgcttcaaactgat
gctagacttcgtttattccataccgtaagcagtcgcttacgaactcatcatcttggtaca
gacgtgccactcagccggtattgtaggttagtacgtcgatgggatgaagaaagctgcagc
tttgatcccaatgaaacgaatctttttatttcctcggcggttgaagttttacgtgaaact
cttttggatgccgctaatagagccgttgcaagccacttgcgtcaggaattccgtgaaaat
gcattccttaggactcagcgattgccctctcgagaaaactgtcgcatattacaaagtatg
gccattcagatgggatgtgttttagatttgtcttcgacaaaatcacttttacgctcttta
agtttgatcgaagacgatactgttcgtaacattttgcagctttattattataaggttacc
ccaagagcagtttatgaaatgcagaagtataaaggcaatctcgcttcccagatgatgagt
cttggtattgaggacgaaagtgacgatttgacacattttacagcacctttggaacgttat
ggtgatattgtagttcattatcaactgcagttgcttttgagaggagaactggcttctgaa
aagcgccttcgtgtatggtcgcaagcggcaaacgatgcaagccgtcgtctggttataagc
aaatttgcgcaagaaactagcattcatataaaaatatttagtgactgggcggagagtcag
gtttggcaagacggtctcgtatgttttgttgctccatcatattttgacgtatttttccca
tctctaggcatggagaaacgtgttcatttagatttgctcaatctaacccacgtaaggttt
gaagaggaccagggcattttatctttatacgacgagagcggagccgttacagttgttaaa
ttgttgacctctgtcaaagttaagctctttgtgcagctttcgactccacctcttatcaac
gtttcaaatgtcgagttttga
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