Schizosaccharomyces pombe (fission yeast): 2539189
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Entry
2539189 CDS
T00076
Symbol
rpt4, SPOM_SPCC1682.16
Name
(RefSeq) proteasome regulatory subunit Rpt4
KO
K03064
26S proteasome regulatory subunit T4
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
2539189 (rpt4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
spo03051
]
2539189 (rpt4)
Proteasome [BR:
spo03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
2539189 (rpt4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_5
RuvB_N
PRS7_OB
AAA_2
AAA_lid_PRS2_C
AAA_22
TIP49
nSTAND3
DUF815
TsaE
AAA_7
AAA_14
AAA_18
Mg_chelatase
AAA_28
RNA_helicase
AAA_33
AAA_24
AAA_3
ATPase
Parvo_NS1
IstB_IS21
Sigma54_activat
AAA_25
bpMoxR
Sec10_N
PhoH
NPHP3_N
AAA_17
Prot_ATP_ID_OB_N
Zeta_toxin
NACHT
Motif
Other DBs
NCBI-GeneID:
2539189
NCBI-ProteinID:
NP_587809
PomBase:
SPCC1682.16
SPCC1682.16.1
UniProt:
O74445
LinkDB
All DBs
Position
III:join(405612..405829,406303..407251)
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AA seq
388 aa
AA seq
DB search
MSERDTALEKYKSYLLQHREWDSKLKDLRFGNRDLVKKYDKTEDDIKSLQSVGQIIGEVL
KQLDSERFIVKASSGPRYVVGCRNNVDQSHLVQGVRVSLDMTTLTIMRILPREVDPLVYN
MSIEDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKT
LLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGR
RFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEI
PLPNEVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDY
VIQSDLMSAARKVADLKKLEGTIDYQKL
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaagagacactgctttagagaaatataaatcctatttattacaacatcgagaa
tgggattcaaaactgaaggatttgcgttttggaaatcgagatctagtcaagaaatatgat
aaaacagaggatgatataaaaagcttgcagtcggttggtcagattattggagaagtattg
aaacaacttgattctgaaagattcattgtaaaagctagctctggtccacgttacgttgta
ggttgcagaaacaatgtcgaccaatctcatttggttcaaggcgttcgtgtatctttagat
atgaccacgttaaccattatgcgtattcttcctcgtgaggttgatcctctcgtttacaat
atgtcaattgaagaccctggtgacatttctttcgccggtgtcggtggcttgaatgaacaa
attcgtgaattgcgtgaagttattgaactacctttaaagaatccggaattattccttcgt
gtgggaattaagccaccaaaaggtgttttgctctatggtcctcctggtactggtaaaact
cttttagctcgtgccgtggcggcatctttaggtgttaactttttaaaagtagtttccagt
gctatcgttgataaatatattggagaatctgctagaataattcgtgaaatgtttggctat
gcaaaagagcatgagccatgtgttatttttatggacgaaattgatgctattggtggtaga
agattctctgaaggaacatctgctgatcgtgaaattcagcgtacattgatggaattattg
aatcagatggatggtttcgattaccttggccaaacgaaaattatcatggcgacaaatcgt
cctgatactctagatcctgccttgcttcgtcctggtcgtctagatcgtaaaattgaaatt
cccctaccaaacgaagttggtcgtatggagattttgaaaatccatttagaaaaagtctct
aaacaaggcgaaattgactatgaagcattggttaaactgacagatggaacaaatggtgct
gacttgcggaatgtggttacagaagcaggattcatagccattaaagaagatcgcgactat
gtcattcagtccgatttaatgtccgcagctcgtaaggttgctgacctgaagaaacttgaa
ggtacaattgattaccaaaagctttag
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