Schizosaccharomyces pombe (fission yeast): 2539214
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Entry
2539214 CDS
T00076
Symbol
mis16, SPOM_SPCC1672.10
Name
(RefSeq) histone H4 chaperone, CENP-A recruiting complex CENP-A chaperone Mis16
KO
K10752
histone-binding protein RBBP4
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03082
ATP-dependent chromatin remodeling
spo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
2539214 (mis16)
03083 Polycomb repressive complex
2539214 (mis16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spo03036
]
2539214 (mis16)
Chromosome and associated proteins [BR:
spo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
2539214 (mis16)
Histone modification proteins
HAT complexes
HATB complex
2539214 (mis16)
HDAC complexes
Sin3A-HDAC complex
2539214 (mis16)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
2539214 (mis16)
PRC2.2
2539214 (mis16)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
2539214 (mis16)
Heterochromatin formation proteins
Other heterochromatin formation proteins
2539214 (mis16)
Chromatin remodeling factors
NuRD complex
2539214 (mis16)
NuRF complex
2539214 (mis16)
NuRF complex (fruit fly)
2539214 (mis16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_EML
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
MIOS_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
2539214
NCBI-ProteinID:
NP_587881
PomBase:
SPCC1672.10
SPCC1672.10.1
UniProt:
O94244
Structure
PDB
PDBj
LinkDB
All DBs
Position
III:join(584135..584219,584292..584397,584486..585587)
Genome browser
AA seq
430 aa
AA seq
DB search
MSEEVVQDAPLENNELNAEIDLQKTIQEEYKLWKQNVPFLYDLVITHALEWPSLTIQWLP
DKKTIPGTDYSIQRLILGTHTSGNDQNYLQIASVQLPNFDEDTTEFTPSTIRRAQATGSY
TIEISQKIPHDGDVNRARYMPQKPEIIATMGEGGNAYIFDTTCHDALTTGEALPQAVLKG
HTAEGFGLCWNPNLPGNLATGAEDQVICLWDVQTQSFTSSETKVISPIAKYHRHTDIVND
VQFHPQHEALLASVSDDCTLQIHDTRLNPEEEAPKVIQAHSKAINAVAINPFNDYLLATA
SADKTVALWDLRNPYQRLHTLEGHEDEVYGLEWSPHDEPILASSSTDRRVCIWDLEKIGE
EQTPEDAEDGSPELLFMHGGHTNRISEFSWCPNERWVVGSLADDNILQIWSPSRVIWGRD
HVQVSPRDLE
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaggaagtagtccaggatgcacctctcgagaataatgaactcaatgccgagata
gacttacaaaaaacaatacaagaagaatacaaactttggaaacaaaatgttccctttctg
tatgacttggtaataacccacgctttggaatggccttctttgacaattcaatggcttcct
gacaaaaaaacaataccaggtactgattactctattcaacgtcttattcttggcactcac
acatctggtaatgatcaaaattatttacagattgcttctgtgcaattaccaaactttgat
gaggataccaccgagtttactccttctacgattcgaagagcacaggccacgggctcgtat
acgattgaaatttcacaaaaaatccctcacgatggcgatgtcaatcgtgctcgttacatg
cctcaaaagcctgaaatcatcgctaccatgggagaaggaggaaatgcttatatttttgat
acaacttgtcatgatgccttaactacaggtgaagcacttcctcaagcagttttgaagggc
catactgctgaaggttttggtctttgctggaacccgaatttacctggaaatctagcaaca
ggagcagaggatcaagttatctgtttatgggatgttcagacacaatcttttacttcctct
gagacaaaagtcatttcccccatagccaaatatcatcgtcatactgatattgttaacgat
gttcaatttcatcctcaacatgaggcattattagcatcggtgtcggatgattgcactttg
caaattcacgatactcggttaaatccagaagaagaagctcccaaagttattcaggctcat
tctaaagccataaatgccgttgccattaatccctttaatgactatcttttagcaacagcc
agtgctgataaaacagtagctctttgggacctccgtaatccatatcaacggttgcatacc
ctggaaggacacgaagatgaggtatatgggttagaatggtcacctcatgatgaacctata
ttggcatccagttcaactgatcgccgtgtttgtatttgggatttagaaaagattggagag
gaacagactccggaggatgccgaggatggttctccagaattactatttatgcatggaggc
cacacaaatcgcatctcagaatttagttggtgtccaaacgagcgttgggtggttggaagt
cttgccgatgataatatccttcaaatatggagcccttctcgtgtcatttggggtcgtgat
catgttcaggtttctcctagggatctggagtaa
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