Schizosaccharomyces pombe (fission yeast): 2539228
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Entry
2539228 CDS
T00076
Symbol
ubp1, SPOM_SPCC16A11.12C
Name
(RefSeq) ubiquitin hydrolase Ubp1
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spo01002
]
2539228 (ubp1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spo04121
]
2539228 (ubp1)
Enzymes [BR:
spo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
2539228 (ubp1)
Peptidases and inhibitors [BR:
spo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
2539228 (ubp1)
Ubiquitin system [BR:
spo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
2539228 (ubp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
DUSP
UCH_1
Gp44_lid
Motif
Other DBs
NCBI-GeneID:
2539228
NCBI-ProteinID:
NP_587999
PomBase:
SPCC16A11.12c
SPCC16A11.12c.1
UniProt:
Q9USM5
LinkDB
All DBs
Position
III:complement(join(889437..891666,891892..892211))
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AA seq
849 aa
AA seq
DB search
MASTATQNASTRYSQIWIDQPASLPFQDSINLIKEDKEKWKKEKTAFLIDYDWFEGYVDF
IYGEGDNPGPITQWRLLDEKNELKHSLEESIDYSIVSASLWHMLVEWFGLEGLAIERKVL
LVGLAAEQKPFVDIYPINFTLHVLFDPINGENTSYSPLYQIDEPYHSDEPYAFSFSRSDT
LRSLYKQVMEAFQISDGTSFRLWYLNKSNLSSRFVSLSEFNDQPAIALLSEYAVCMTIFE
IDIADGSLLLEFQHPNGEWLSDSITKEQNLTINKEIGLCGLYNLGNSCYMNSALQCMIHT
HELTKYFLSDSYEKDINYNNPLGMMGKVALSYASLLKMIHHTADMHSVSPSSFKFIIGEF
NTYFSGYRQQDSQEFIAFFLDGLHEDLNRIQIKPYFERPDLFDEHPLHVQRVANQCWDIH
TKRNDSIIVQLFQGMYKSTLECSICYQKSTAFDPFMYLTLPLPTSAKWRHKVVYVPPFGT
QSPVELYLELLMESTVIQMKFQATEKLQKMGLECGELTACDIYRGKVYKVLKNKDKISKK
IHKWDHVVLYGSTANGLTIPIVHGCKRPAMPGSYQSNDVFGFPLQLNVRSRNVLTNDLVK
EIVELYRVYAGIDVAIGTLQLGLKRMESKAGKWECIKEIEVKRFEIVEEEEIVIDDKTVI
MCLWNDQQYEKLFYNCEWIFEKIQFHMESITLEDCLLEFSKPEQLDLQDSWYCPGCKAFR
PATKRLEIWRLPKILVIHLNRFSGHGGDLRRRRKRRDLVVYPVFDLNLKQFLSPFIKDHE
WLSSQKSMLYDLYAVDNHHGFMSNGHYTAYARDASSQTFFKFDDTAICEIDPEDIVTSSA
YVLFYRAKN
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaactgctactcaaaacgcaagcactcgatattcccaaatttggatcgaccaa
cctgcttcattgccgttccaagattcgataaatttaattaaagaggataaagaaaaatgg
aaaaaagaaaaaactgcctttttaattgactatgactggttcgaaggatacgttgacttt
atatatggagaaggcgacaaccctggtcctataactcaatggaggctgctggatgaaaaa
aacgagcttaaacattctttggaggaatctattgattatagcattgtctctgcttcgcta
tggcatatgcttgttgagtggtttggattagaaggtctagctatagagcgaaaagttctt
ttggtaggattggctgctgagcaaaagccattcgtagatatctatcctataaactttact
ttgcacgttttattcgacccaataaacggtgaaaacacgagctattcaccattataccaa
attgatgaaccatatcatagtgatgaaccctatgcgtttagcttttcccgaagtgatacc
cttcggtctttgtacaaacaagtgatggaagctttccaaatatctgatggtacttctttc
cgtttatggtatctaaacaaaagtaatctatcttctaggtttgtaagtttgtcggagttc
aatgatcaacctgcgattgctttgctttccgagtatgctgtttgcatgactattttcgaa
atagatattgccgatggaagcttattgctcgagtttcaacatcctaacggagagtggtta
tctgactctataaccaaagagcaaaatttaacaataaataaagaaatcggactctgcggt
ctttacaatttgggtaattcatgctatatgaattctgcccttcaatgtatgatacataca
cacgaacttacaaaatattttcttagtgattcttatgaaaaggatattaattacaacaat
ccgttgggaatgatggggaaagttgccttgtcttatgctagtctactgaagatgatccat
catactgctgatatgcactcggtgtcacctagttctttcaaatttataattggcgagttt
aatacctatttttctggatatcgtcagcaagattctcaggaattcatcgcctttttctta
gacgggttacacgaagatttgaatcgaattcagataaaaccatactttgaaaggccagat
ttatttgacgaacacccattacatgttcagagagttgcaaatcaatgttgggatattcat
acaaaacgaaatgattccataattgttcagttgtttcaaggaatgtataaaagcacctta
gagtgctccatatgctatcaaaaatcaactgcgtttgatccgttcatgtatcttactctt
ccacttcctactagtgcaaaatggcgacacaaggtagtgtacgtcccgccatttggcaca
cagagtcctgtggaattgtatttggagcttctcatggaaagtacggtaatccaaatgaag
tttcaagctacggaaaagcttcaaaagatgggactcgaatgcggggaacttactgcttgt
gacatttatcggggaaaggtgtacaaggtattgaaaaataaagacaaaatatctaaaaaa
attcataaatgggatcatgttgtactttatggaagtactgcaaacggattaacaatacct
atcgtccatggatgtaaacgaccggcaatgcccggatcataccagtctaacgatgtgttt
ggatttcctttacaactcaacgtccgttctcgaaatgtactcacaaatgatttagtgaaa
gagattgtcgaactgtatcgagtttatgcaggcatagacgtagcaatcggaactcttcag
cttggactgaagcggatggaaagtaaggccgggaaatgggaatgcataaaggaaattgag
gttaaaaggtttgaaatagtggaggaagaggaaatcgttattgacgacaaaactgtaatt
atgtgtctatggaacgatcaacaatatgaaaagttattttataactgcgaatggatattt
gaaaaaattcagttccatatggagtccatcacccttgaagattgtttactggagttttcc
aagccagagcagcttgatttacaggattcctggtattgtcctgggtgtaaggcatttcga
ccggcaacaaaacggctggagatctggcgattgccaaaaatactagtcattcatttaaat
cgattcagcggccacggtggagatttgcggagaagacgtaaacgaagggatttagtagtt
tatccagtatttgatctcaatttgaagcaatttttgagtccatttataaaagatcatgag
tggctatcgtcacagaaatcgatgctttacgatttgtatgcagtggacaatcatcacggg
tttatgagtaatggtcattatactgcctatgcaagagatgcatcgagccaaacattcttt
aagtttgatgatacagctatttgtgaaatagatccggaggatattgtcacatcgtctgct
tatgtattgttttacagagcaaagaattaa
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