Schizosaccharomyces pombe (fission yeast): 2539294
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Entry
2539294 CDS
T00076
Symbol
tfg1, SPOM_SPCC1620.09C
Name
(RefSeq) transcription factor TFIIF complex alpha subunit Tfg1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
2539294 (tfg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spo03021
]
2539294 (tfg1)
Transcription machinery [BR:
spo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
2539294 (tfg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
2539294
NCBI-ProteinID:
NP_588467
UniProt:
O94416
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All DBs
Position
III:complement(join(2161331..2161515,2161565..2162363,2162405..2162500,2162584..2163123))
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AA seq
539 aa
AA seq
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MDSQETKVFENVKQENPDEKKPKVEEPDSQNNASTQSQQKFLDFQLSWCPESERKTTKYH
LLKFHSNKAIDPSKSFVPPIKMQRRDPNAPSSSNGEQNAEQGSSSNVNIASIAPYGGAQN
MKQNAFKRKTRQVVKVDPQARRLQEEELSPWIMEDFEGKNTWVSTMEGGQSSAYVLFMFS
ENGFKVIPTDRFYRFNQRNNFQTLSIDEAEAKMNKKTPIPRWFMKKESEENLAEAGSASP
MYKLKTVPNARPVTGPRASGSDDELDYDEEFADDEEAPIMEGNEEDNKKLKDKIKKEMLT
ANLFGEADQDVDLEEENDRQMSREGKKLQRYLKLLEKNLAYESDEEDEDPYASSHDASSE
EEVLQEEEELQKREEKLKSRFSANASKTNTPRPLERTPSSVSPVKASSQLQSPNTSIQIR
PQEQLINKPGYIILRLSSEKLSRFANDFPRMVPSMGSTETSVGDQVEVVGDTTNVPIDDS
NLITEAEVMKALRAGPISIKDLVHLFQRKIRADNRNRLGIQKIIRKVARFENKLLVLKN
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggattcacaagagacaaaagtttttgaaaatgtaaagcaggaaaatcctgatgagaag
aaacccaaagttgaggagcctgactcccaaaataatgcttcgacacaatcgcagcaaaaa
tttttggatttccagctttcatggtgtccagagagtgaaagaaaaacaactaaataccat
ttattaaaatttcactctaacaaagccattgatccttccaaatcctttgtgccacccata
aaaatgcaacgcagagaccccaatgctccatcttcgtcaaacggagaacaaaatgcagaa
caaggaagctccagtaacgtgaacatcgcttcaatcgctccttacggtggcgctcaaaac
atgaagcagaatgcctttaaaaggaaaactcgccaggtcgtcaaagttgatccacaggcc
cgcagactacaagaggaggagttatctccttggattatggaagattttgaaggaaaaaac
acatgggttagtacgatggaaggcggccaatcgtctgcatatgtattgttcatgttctct
gaaaatggttttaaggtgattccaactgatagattttatcgatttaatcaacgtaacaat
ttccaaacgctttcaattgatgaagcggaggcaaagatgaataaaaaaactccgattcct
cgctggtttatgaaaaaggagagtgaagaaaacttagcagaggcaggctctgcttcaccc
atgtataaacttaagacggttccaaatgcacgtcctgtaacgggaccgagagctagtgga
agtgatgatgaactagattatgacgaggaattcgctgacgatgaagaagcacctattatg
gaaggaaatgaagaagataataagaagttgaaagacaagattaaaaaggaaatgctaact
gccaatttgtttggtgaagctgatcaagatgtcgaccttgaagaggagaatgatagacaa
atgtcgcgtgaaggaaaaaagctgcaaagatacttaaaattgcttgaaaagaatttagct
tatgagagtgatgaggaagatgaggacccttatgcttcctcccatgatgcgtctagtgaa
gaagaagttttgcaagaagaagaagaattgcaaaagcgtgaagaaaaactaaagtctaga
ttttctgcgaacgcttccaaaactaatacaccaagaccactagaacgaacgccaagcagc
gtatctcctgtcaaagcttcatcgcaactacaatcacctaatacttctattcaaataagg
cctcaagaacaacttattaacaaacctggatatataattctccgcttatcaagtgaaaag
ttatcacggtttgccaatgactttccccgtatggtccctagcatggggtctacagaaacg
agtgtaggagatcaagtggaggttgtgggagatactacaaatgttccaattgatgattct
aatctgattacggaggcagaggtaatgaaggctttaagagctggtcccatttctattaag
gatctagttcacctgttccaacgcaaaattagagccgacaacagaaatcggttgggaata
cagaagatcattcgaaaggttgctcgatttgagaacaagctactcgttttaaaaaactag
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