Schizosaccharomyces pombe (fission yeast): 2539357
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Entry
2539357 CDS
T00076
Symbol
prp18, SPOM_SPCC126.14
Name
(RefSeq) U5 snRNP-associated protein Prp18
KO
K12817
pre-mRNA-splicing factor 18
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
2539357 (prp18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spo03041
]
2539357 (prp18)
Spliceosome [BR:
spo03041
]
Complex C
Other components
Step II factors
2539357 (prp18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
VDE
Motif
Other DBs
NCBI-GeneID:
2539357
NCBI-ProteinID:
NP_588457
PomBase:
SPCC126.14
SPCC126.14.1
UniProt:
O94406
LinkDB
All DBs
Position
III:join(2141190..2142146,2142192..2142266)
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AA seq
343 aa
AA seq
DB search
MDFLKEEIERKRRQLEGTSELPVKKAFRRGDWEKEREKKYLQEKQQKDEQRELKKRKLEE
ERLKYEEKKLRISRLANKESSRNEELLTETTTPSPAVKASPASTKLSVSENDRLSIPEIT
KDNLTLTEIIAKLREMKEPIRLFGESEEATIQRYYSLLKYKKLEEIENELLTKGVETIDF
EHATTTKPKVSKQVVAFLQHGIRIWDNFLSSKSINSFESSESQMQLKIFRQAKQDLDVLI
QLIVDEALNDDIFKSIAEICYRCQKHEFVKANDMYLRLTIGNAPWPIGVTMVGIHERSAH
QRLQANPSSNILKDEKKRKCLQALKRFITFQERESSNLPEYTD
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggattttttaaaggaagaaattgaacgtaaacgtcgccaactagaaggaacgagcgaa
cttccggtaaaaaaggcgtttcgacgaggggattgggagaaggaaagggaaaagaaatat
ctgcaggaaaaacaacaaaaggatgagcaaagagagttgaaaaaaagaaagttggaagaa
gaacgtcttaaatatgaagaaaagaagttacgcatttcacgacttgcgaacaaagagagc
agtagaaatgaagagttgcttacagaaacaacaactccctcaccagctgtcaaagcgtca
cctgcaagtacaaaattatctgtctccgaaaacgaccgtttatcaatacctgaaatcaca
aaagacaacctcacgttgaccgaaattattgcaaagcttcgtgagatgaaagagccaatt
cgtttgtttggagagtcagaagaggctaccattcaacgatattacagtttgctaaaatac
aaaaaactggaagaaattgaaaatgaactccttactaaaggagttgaaacaatcgacttt
gagcatgctactaccaccaaacccaaagtatccaagcaagtagttgcttttcttcaacat
ggaatccgcatttgggacaactttttgtcttcaaaatccatcaactctttcgaaagttct
gagagtcagatgcaattaaaaatatttcgtcaagctaagcaagatcttgatgtacttata
caactgatagtcgatgaagctttaaacgacgatatttttaaaagcatagctgaaatttgt
tacagatgccaaaaacacgaatttgtcaaagccaatgatatgtatttacgtctgacaatt
ggaaatgcaccttggcctattggagttactatggttggtattcatgaaagaagtgcacat
caacgattacaagcaaatccaagttcaaatatacttaaagacgaaaagaagagaaagtgt
ttgcaagctttaaagcgatttattacttttcaggaaagagagtcatcaaacttacctgaa
tatacggattga
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