KEGG   Schizosaccharomyces pombe (fission yeast): 2539362
Entry
2539362           CDS       T00076                                 
Symbol
tho3, SPOM_SPCC18B5.10C
Name
(RefSeq) THO complex subunit Tho3
  KO
K12880  THO complex subunit 3
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo03013  Nucleocytoplasmic transport
spo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    2539362 (tho3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    2539362 (tho3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spo03019]
    2539362 (tho3)
   03041 Spliceosome [BR:spo03041]
    2539362 (tho3)
Messenger RNA biogenesis [BR:spo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     2539362 (tho3)
Spliceosome [BR:spo03041]
 Complex C
  Other components
   EJC/TREX
    2539362 (tho3)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    2539362 (tho3)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_EML_2 WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_WDR3_1st ANAPC4_WD40 WDR55 EIF3I Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd eIF2A Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N Beta-prop_NOL10_N Beta-prop_IFT140_1st Beta-prop_EML DSE1_N Beta-prop_Vps41 Cytochrom_D1 Beta-prop_HPS5 WD40_MABP1-WDR62_1st PROPPIN CFAP251_N WDR90_beta-prop_4th B-prop_COPA_B_2nd PAC11 Beta-prop_EIPR1
Other DBs
NCBI-GeneID: 2539362
NCBI-ProteinID: NP_587940
PomBase: SPCC18B5.10c SPCC18B5.10c.1
UniProt: Q9USL1
LinkDB
Position
III:complement(join(738016..738159,738226..738304,738350..738594,738637..738705,738758..738849,738893..739166,739229..739255))
AA seq 309 aa
MCASVTESLPKFPELKTRDLQGQQGPIRSLGWNLSGSRLASSSSSGSVLVWNSDRLDFKF
TTELGNRGYGLVEQLVWDPTHSDRLMAVYAGKMIRFWDFRSAKPIAEIESNYENIYATWS
PSGNYCCASSRDDMLSFIDARERRIMETFQQPCETNECCWSFSEDLFFMTTGLGTVQIME
WPSLKRVYDIKAHNSNCFCIEFSPDNRHLAIGGADAITSLWDPQELICERSITRMDYPIR
TLSFSYDSRYLASGSEDRYVDIADTKTGDQIWKIPTNGPLNKVAWHPTKHILAYAVSEPN
SSGLKIFGL
NT seq 930 nt   +upstreamnt  +downstreamnt
atgtgtgcttcagttacagaatcgcttccaaagtttcccgaattgaaaactcgagattta
caagggcaacagggacctatacgttccctaggctggaatctttccggctcgagacttgcg
agttcttcatcttcaggatcagtacttgtttggaattcagatcgtttggattttaaattt
actactgaattagggaacagaggatatggtcttgtcgaacaactagtatgggatcctacg
cattctgatcggttaatggctgtgtatgctgggaaaatgatccgtttctgggactttaga
agcgccaaacctatcgctgaaatagaaagcaactatgagaatatttatgcaacctggagt
ccaagtggaaattactgctgtgctagtagtcgggatgatatgttgtcttttattgatgct
cgggaaagaagaataatggagacattccaacaaccttgtgagacaaatgaatgctgttgg
tcattcagtgaagatttgtttttcatgactacaggacttggcacggtgcaaattatggaa
tggccttctctaaaaagagtttacgatataaaggcgcataactcaaattgtttctgtatt
gaattcagtccggataacaggcaccttgccattggtggtgcagatgcaattactagttta
tgggatccacaagaactgatttgtgaacggtcgattactagaatggattatcccatccgt
acattaagctttagttatgacagtcgctatttagctagtggatcagaggaccgctatgtg
gatatcgctgatacgaaaactggtgatcaaatttggaaaattccaactaatggacctctg
aacaaggtagcttggcatccaacaaaacatattttagcatatgctgtatcggagcctaat
tctagtggtcttaagatatttgggctataa

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