Schizosaccharomyces pombe (fission yeast): 2539434
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Entry
2539434 CDS
T00076
Symbol
rnc1, SPOM_SPCC757.09C
Name
(RefSeq) RNA-binding protein Rnc1
KO
K18738
heterogeneous nuclear rnp K-like protein
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spo03019
]
2539434 (rnc1)
Messenger RNA biogenesis [BR:
spo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
2539434 (rnc1)
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_5
Motif
Other DBs
NCBI-GeneID:
2539434
NCBI-ProteinID:
NP_587684
PomBase:
SPCC757.09c
SPCC757.09c.1
UniProt:
O74919
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Position
III:complement(65489..66685)
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AA seq
398 aa
AA seq
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MAYNHFSIPKNIEEKENSFFDVTFQDEPDETTSTATGIAKVSIPTPKPSTPLSTLTNGST
IQQSMTNQPEPTSQVPPISAKPPMDDATYATQQLTLRALLSTREAGIIIGKAGKNVAELR
STTNVKAGVTKAVPNVHDRVLTISGPLENVVRAYRFIIDIFAKNSTNPDGTPSDANTPRK
LRLLIAHSLMGSIIGRNGLRIKLIQDKCSCRMIASKDMLPQSTERTVEIHGTVDNLHAAI
WEIGKCLIDDWERGAGTVFYNPVSRLTQPLPSLASTASPQQVSPPAAPSTTSGEAIPENF
VSYGAQVFPATQMPFLQQPKVTQNISIPADMVGCIIGRGGSKISEIRRTSGSKISIAKEP
HDETGERMFTITGTHEENEKALFLLYQQLEMEKDRRSH
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggcttacaatcacttcagcattcctaaaaacatcgaggaaaaagagaactcttttttt
gacgtaacgtttcaagacgaacccgacgaaaccacttctactgctactggcattgctaaa
gtttccatacctactccaaagccctctacacctctatcgactcttactaacggttctact
attcaacagtccatgaccaaccaacccgaaccaacgtctcaagtgcctcccatctctgcc
aagccaccgatggatgatgccacctatgctactcaacaacttaccttgagagccttactt
tctactcgtgaagctggtatcattattggtaaagctggaaaaaacgttgccgaactcaga
agcactacaaatgtcaaggccggcgttaccaaggctgttcctaatgttcatgatcgtgtt
ttaactattagtggaccactagagaatgttgttcgcgcttatagattcatcatcgatatt
tttgccaagaacagtactaaccctgatggtacaccttccgacgccaacacacctcgcaaa
cttcgtcttttgatcgcccattctctgatgggtagtattattggccgcaatggtttgcgt
atcaagcttattcaggacaaatgtagttgccgtatgattgcttccaaagacatgcttcca
cagtctactgagcgtacagttgaaatccatggtacagtcgataatcttcatgctgccatt
tgggaaattggcaaatgcttaattgatgactgggagcgtggcgccggtaccgttttctat
aatcccgtttctcgtttgactcaacctcttccttctcttgcgtcgactgcatctcctcaa
caagtctcccctccagcagctccctccacgacttctggtgaagctatccccgaaaacttt
gtttcttacggtgctcaagtctttccagctacccaaatgcctttcttgcagcaacctaag
gttacccaaaatattagcattcccgcagatatggttggttgtataataggtcgtggagga
tctaagatttcggaaatccgtcgtaccagcggtagcaagatttccattgccaaagaacct
catgatgagacaggcgaacgtatgttcaccattacaggtacacacgaggaaaatgagaaa
gcccttttcttactctaccagcaattagaaatggaaaaagatcgtcgttctcattaa
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