KEGG   Schizosaccharomyces pombe (fission yeast): 2539459
Entry
2539459           CDS       T00076                                 
Symbol
pwi1, SPOM_SPCC825.05C
Name
(RefSeq) splicing coactivator Pwi1
  KO
K13171  serine/arginine repetitive matrix protein 1
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo03013  Nucleocytoplasmic transport
spo03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    2539459 (pwi1)
   03015 mRNA surveillance pathway
    2539459 (pwi1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spo03019]
    2539459 (pwi1)
   03041 Spliceosome [BR:spo03041]
    2539459 (pwi1)
Messenger RNA biogenesis [BR:spo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     2539459 (pwi1)
Spliceosome [BR:spo03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   SR-related proteins
    2539459 (pwi1)
SSDB
Motif
Pfam: PWI
Other DBs
NCBI-GeneID: 2539459
NCBI-ProteinID: NP_588055
PomBase: SPCC825.05c SPCC825.05c.1
UniProt: Q9USH5
LinkDB
Position
III:complement(join(1031434..1031901,1031940..1032269,1032329..1032418,1032472..1032489))
AA seq 301 aa
MSGFYKGVAAEQETLFTTADKKLMRSTKFPASYDTKVDMKKVNIEVLKPWIATRLNELIG
FEDEVVINFVYGMLEEAVEASKTSDSQNESTLDPRKVQLNLTGFLESNATAFTEELWSLI
ISASQNQYGIPEKFILEKKEEISKLKDRTEASKEESKTVTDHSNRRESRRESTYYDSRER
NGKRTSRSTLDRKRFHDASDTERNRYGRSPSPHSRFSEKPRGERYDIRSYSRSHKERYED
RYRPTRRRERHYRTRDDEGFDEFGRSRDGRWRESRTSYREKHRYDRDALSSESDSGTQKH
D
NT seq 906 nt   +upstreamnt  +downstreamnt
atgagtgggttttataagggtgttgccgccgagcaggaaaccctatttacgactgcagac
aagaagttgatgcgaagtacaaagtttcctgctagttatgatactaaggttgacatgaaa
aaagtgaatattgaagtccttaaaccttggattgcgactcgattgaacgaactaattggg
tttgaggacgaggttgttataaattttgtgtacggcatgctggaagaagcagtcgaagcc
tcaaaaacaagtgattcccaaaatgaatcaacacttgatcctagaaaggttcaattgaat
ttaacgggatttttggaaagcaatgccacggccttcaccgaagagctttggtcgttaatt
atctctgcctcgcaaaaccagtatggaattccggaaaaatttattttggagaaaaaggaa
gaaatatcaaaactaaaagatcgaactgaggcttcaaaagaagaatcgaagactgtgact
gatcattcaaatcgtagagaatcaaggcgcgagtcaacttattatgactcaagagaaaga
aatgggaaaagaacatcacggtctactttagaccgtaaaaggtttcatgatgcaagtgac
actgaacgtaacagatatggtcgaagcccgtcgcctcattctcggttctcagaaaagcca
agaggtgagaggtacgatattcgctcttattcacgctctcataaagaaaggtatgaagat
cgatatagaccaactcgacgtcgggaacgacattatagaacacgagatgatgaaggattt
gatgagttcggaagatctcgagatggaagatggagggaatctcgaactagttacagagaa
aagcaccgatatgaccgggatgcactctcctctgaaagcgactcaggaacgcagaaacat
gattaa

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