Schizosaccharomyces pombe (fission yeast): 2539462
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Entry
2539462 CDS
T00076
Symbol
vps35, SPOM_SPCC777.13
Name
(RefSeq) retromer complex subunit Vps35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
2539462 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spo04131
]
2539462 (vps35)
Membrane trafficking [BR:
spo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
2539462 (vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
2539462
NCBI-ProteinID:
NP_588260
PomBase:
SPCC777.13
SPCC777.13.1
UniProt:
O74552
LinkDB
All DBs
Position
III:join(1619556..1621163,1621204..1621317,1621361..1621710,1621765..1621822,1621870..1621944,1622032..1622337)
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AA seq
836 aa
AA seq
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MNGINTANEEITRSLEESLNICKQSSRLMQRNLQTGRLMDAFRNCSISLVEMRNSALTPK
QYYELYMFNMESLRLLGGTLLETHLNGTHNLMDLYELVQYAGSIVPRLYLMITVGSAYLE
TPNALVREIMNDLLDMCRGVQHPLRGLFLRHYLLTQTRKGLPLGSEDEEDASRKGTVLDS
VKFLVINFTEMNKLWVRIQHLGPIKEFSKRTQERNELKVLVGLNLVRLSQLNLDIDTYRD
HVLPAIIEQIIECRDSLAQEYLVEVICQAFSDNMHLQTLDTYFGTVIKLSPSVNVTQLVV
AMLNRLTDYVQREYESDSSNEDESETVTEKLGDIKINEEVQQKDEQECPGDKVIPPEYAI
QEVLWSHVVEVIQSRSGLPLDCIVSILSSILNFFLRCYPYKPQYADRVFQYINEHIINQP
SLRSALHERPLQKSLCAILLLPLTYFPSFSYCLELQNFLPVFNAQDPNLRYDIARMIVQK
IIEKGHSLSELTEAQELLGFVSVIIEKKGVDSLDDLQNVALMVHYLNNDDPQIQIEILRS
LKDTFIKAGENVKYLLPVVVNRCIFLARNFRIFKCMDWAEKVRLLWEFVNTCINVLYKNG
DSLELCLALYLSAAEMADQENYPDFAYEFFTQAFSIYEESVLDSELQYQQLLMIIGKLQK
TRNFSVDDYDTLITKCTLYASKLLKKPDQCCGIYLASHLWWQVASGEDSRPFQDPKRVLE
CLQKSLKIADACMDQLTSLKLFINILERYFYYYDQHCESIIAKHISGLIDLTEQNMRSIL
ISSPADLIASDPRAYASSIWEVANVSVIDSLKNHLERATAYAEKRSEDERWSSIFQ
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaattaatactgctaacgaagaaattacaaggagcttggaagagtccttaaat
atttgcaagcagtctagtaggctgatgcaaagaaacttgcagacaggacgattgatggat
gcatttcgtaattgcagtattagtctcgtggaaatgagaaattctgcacttactccaaaa
caatactatgagctgtatatgtttaatatggaaagcttgcgtttacttgggggcacattg
ctggaaacgcatctgaacggtactcacaacctaatggacctttatgaacttgttcaatat
gccggtagtattgtccctcgtttatatctcatgataaccgttggaagcgcttatttggaa
acgcctaatgcccttgtacgtgaaattatgaatgatttgttagatatgtgtagaggtgtt
cagcatccgttaagaggtctttttttgcgccattatctgcttacccaaacaagaaaagga
ttacctttgggatcagaagatgaggaagatgcatctcgcaaaggaaccgtactcgattct
gttaaatttttagttatcaactttacggaaatgaataaattgtgggttagaatccaacat
cttggtccaattaaagaattttccaaacgtacccaagaaaggaatgagctaaaggttctt
gttgggctgaatttggttcgattatctcagttaaacctcgatatagacacttaccgagat
catgtccttcctgccataatcgagcaaattattgaatgtcgggactcacttgcacaagag
tatcttgttgaagtaatttgtcaggcgttttctgataatatgcatcttcaaaccctcgat
acatatttcggtacggtcataaagctttctccaagcgtaaacgtaacccaacttgtggtc
gctatgttgaatcgccttacggactatgtccaacgtgaatatgaatctgattcttctaat
gaagatgaatctgagactgtaaccgaaaaattaggagacataaaaattaatgaggaagta
cagcaaaaagacgagcaagaatgccctggagataaagtaattcctccagaatatgctatt
caagaggttttatggtcacatgttgttgaagttattcaatctcgtagtggtcttccacta
gattgtattgtttctatactttctagcatcctcaattttttcttgcggtgttacccttat
aaaccccagtatgcagatcgtgtttttcaatacattaacgaacatatcattaaccagccc
tccttacgaagcgctcttcatgaacgtccattacaaaaaagtctttgcgcaattttattg
cttcctcttacatatttcccttccttttcttactgtcttgagctacagaatttccttcct
gtatttaatgcgcaagatccaaaccttcgttacgatattgcaagaatgattgttcaaaag
ataattgaaaaaggccactcattaagtgagcttacagaagcacaagagctactaggtttt
gtgtctgtcattattgaaaaaaagggagttgatagccttgatgacttacaaaacgttgct
ttgatggttcattatttgaataatgatgacccgcaaattcaaatagagatacttcgatcc
ttgaaagatacatttataaaagccggtgagaatgtcaaatatcttttgccggtcgttgtt
aatagatgcatattccttgcacgaaactttcgaatatttaagtgtatggattgggctgag
aaagttcgtcttctttgggaatttgtaaacacttgtatcaatgttctttacaaaaacgga
gattctttagagctgtgccttgcattatatttaagtgccgctgaaatggctgatcaagaa
aattatcctgattttgcttacgaatttttcacacaggcgttttctatttacgaggagtct
gtccttgactctgaattgcaatatcaacaattactaatgattatcgggaaattacagaaa
actcgtaatttctctgttgatgattatgacacgttaattacaaagtgcactttatatgct
tcaaagcttttgaaaaagcctgatcaatgttgtgggatttacttggctagtcatctatgg
tggcaggtcgcatcaggagaagattcaaggccttttcaggatccaaaacgggtactcgaa
tgtctgcaaaaaagtctcaagattgctgatgcttgtatggatcagcttactagcctgaag
ctttttatcaatatattggaacgttacttttattattatgatcagcattgcgaatctatc
attgccaaacatataagtggactaattgaccttacagagcagaacatgagatccatttta
atatcctcgcctgccgaccttattgctagtgatccaagagcgtatgctagttcgatctgg
gaggttgctaatgtatcggtaattgattctcttaaaaatcatttagaaagagcaactgct
tacgcagagaaacgttctgaagatgaacgttggtctagtatttttcaatga
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integrated database retrieval system
