Schizosaccharomyces pombe (fission yeast): 2539515
Help
Entry
2539515 CDS
T00076
Symbol
rib2, SPOM_SPCC4G3.16
Name
(RefSeq) bifunctional CMP deaminase family methyltransferase/riboflavin-specific deaminase
KO
K14655
tRNA pseudouridine32 synthase / 2,5-diamino-6-(5-phospho-D-ribitylamino)-pyrimidin-4(3H)-one deaminase [EC:
5.4.99.28
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo00740
Riboflavin metabolism
spo01100
Metabolic pathways
spo01240
Biosynthesis of cofactors
Module
spo_M00911
Riboflavin biosynthesis, fungi, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
2539515 (rib2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spo03016
]
2539515 (rib2)
Enzymes [BR:
spo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
2539515 (rib2)
Transfer RNA biogenesis [BR:
spo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
2539515 (rib2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
Inv-AAD
Methyltransf_16
MafB19-deam
APOBEC_N
SNAD4
DUF6852
Motif
Other DBs
NCBI-GeneID:
2539515
NCBI-ProteinID:
NP_587822
PomBase:
SPCC4G3.16
SPCC4G3.16.1
UniProt:
P87241
LinkDB
All DBs
Position
III:complement(440054..441271)
Genome browser
AA seq
405 aa
AA seq
DB search
MQIPEKYLSSVDNVEEETQILFALSKQKDADLGMLDSKQEQIALTIGNKPIKVKQSLQSL
HQSRGSTGSVLWKTSVKVVPWLLQQSWFMNSLTPKTSILELGSGISGLAGILLSPFVGNY
VASDKQLYLKKIRENLDQNNASDVEVHELDWKSTPYPKDWTFDFLDYVLFFDCIYNPHLN
AHLVSCLASLAERYPGMQCLFAQELRDQETLVDFLERVRPYFEVDLIKMEEINKTSVASS
TNLPPANMSLFIMKPYNHEEYMLKALNEAKKCEPTDSAFCVGAVIVQNGKIVSTGYSRER
PGNTHAEECAIEKFMLKNPTDSLEGAIMYSTMEPCSKRLSKKVSCTDLIVKQKFSTVVLG
SLEPDIFVKCEGVDLLKKAGIVVIEKLTFQDDCLREAVRGHPPKH
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattccagaaaaatatttaagttctgtcgataatgtggaagaagagactcagatt
ttatttgcattgtcgaaacaaaaggatgcagatttaggaatgcttgattcgaagcaagaa
caaattgctttaacaataggcaacaagcccatcaaggtaaaacaaagtcttcaatcatta
caccaaagccgaggttctactggttctgtcttgtggaaaacgtcagtaaaagttgttcct
tggttattgcaacaatcttggtttatgaatagtttaacgcctaaaacttcaattctcgag
ttgggttctgggattagcggattagctggtattcttttaagtccttttgtgggaaactat
gtcgcttcagataaacaattgtacctgaaaaagatacgagagaatttagatcaaaacaac
gcttctgatgttgaagtccatgagttggattggaaatctacaccctatccaaaggactgg
acatttgactttttggattatgtgcttttctttgattgcatttataatcctcatcttaat
gcccatctagtttcctgtttagcatctttagcagaaagatatcctgggatgcaatgtttg
tttgctcaagaactacgtgatcaggaaacccttgttgattttttagaaagagtacgacct
tactttgaggttgatcttattaagatggaggagataaacaaaacttcggtagcttcctca
acaaatcttccacctgcgaatatgtccttatttataatgaaaccttacaaccatgaagaa
tatatgctaaaggccctcaacgaagcaaagaaatgtgagcctactgattcagcattttgc
gttggcgctgttattgtacagaatggaaaaatcgtgtcaacgggctattctcgtgaacga
ccaggaaacacacatgcagaggaatgtgctatagaaaaatttatgcttaaaaatcctact
gattctttagagggcgctataatgtacagtacaatggaaccttgcagcaagcggttatca
aaaaaagtgtcttgtacagatcttattgttaagcaaaagttttctacggtagttttggga
tctctggagcctgatatattcgtaaaatgtgaaggtgtggatttactcaagaaagctgga
atagttgttatcgagaaactgacttttcaagacgattgcttacgtgaagcagttcgtggt
caccccccaaagcactaa
DBGET
integrated database retrieval system
