KEGG   Schizosaccharomyces pombe (fission yeast): 2539579
Entry
2539579           CDS       T00076                                 
Symbol
tdp1, SPOM_SPCP31B10.05
Name
(RefSeq) tyrosyl-DNA phosphodiesterase Tdp1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    2539579 (tdp1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spo03400]
    2539579 (tdp1)
DNA repair and recombination proteins [BR:spo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     2539579 (tdp1)
SSDB
Motif
Pfam: Tyr-DNA_phospho DUF2115
Other DBs
NCBI-GeneID: 2539579
NCBI-ProteinID: NP_587861
PomBase: SPCP31B10.05 SPCP31B10.05.1
UniProt: Q9USG9
LinkDB
Position
III:529173..530783
AA seq 536 aa
MSTLEPEKRRQHEDKSNEIIDSPIFLNKISALPESENVHCLLLKQLIGSPQLKQTWQFNF
CVDLNFLLENMHASVFPTVDVRITHGYDSKSDSLARLTAQMNHCPVNVKLYSVYVPMWGT
HHSKIMVNFFKDDSCQIVIHTANLVEPDWIGMSQAIFKTPLLYPKANDSLSTSSVPEYGN
PSKIRKHEGSLDIKDDRNCDIIDVDSAFENFKHKSDTRSSDDLGVIGRQFQQDFLAYLKN
YRHTYELIEKLKMYDFSAIRAIFIGSVPGKFEGEEESSWGLGKLKKILKMLEKDSKKDEK
TKFEESDICISQCSSMGSFGPKQEYIAELTDGFGCQRGNWKFLFPTVKEVQQSMLGWQSG
SSIHFNILGKTAASQVETLKKGKNLCKWVAMKAGRQRVAPHIKTYMRFSNDGELLRWVLV
TSANLSKPAWGTLEGHKAKSRSTRGLRIRSYEAGVLLYPKLFEESQRAPCIMTPTYKTNT
PNLDEKRREFYGKRVIGVRMCWDFPPVEYEDKDEIWSPVINRTDKDWLGYVWPPNW
NT seq 1611 nt   +upstreamnt  +downstreamnt
atgtctactcttgagcccgaaaagcgtagacaacatgaagataaatcgaatgaaataatt
gactctcctattttcttaaataaaatttctgcattaccggaaagcgaaaacgttcattgt
cttcttttaaaacagctcattggaagccctcaattaaagcagacttggcaatttaatttc
tgtgtcgaccttaattttttgttggaaaacatgcatgctagtgtcttccctactgtcgat
gtccgtattactcatggatatgactccaagtctgatagtttagcaagactaactgcccag
atgaaccattgccctgttaatgtcaaactgtacagtgtttacgttccaatgtggggcacg
caccattctaagattatggtgaattttttcaaagatgattcatgccaaattgtaatacac
acagccaatttagttgaaccagattggattggcatgtctcaagccatcttcaaaacccct
ctactatatcctaaagcgaacgattccctttcaacttctagtgttcctgaatacggtaat
ccatccaagataaggaagcatgagggaagccttgacatcaaagatgatcgaaactgtgat
attattgatgtagattccgcttttgagaattttaaacataagtccgatacaaggagtagc
gatgatttgggtgtaatcggtcgacaatttcaacaagatttcttggcctatttgaagaat
tataggcacacatatgagcttattgagaaactgaaaatgtatgacttttcagcaatcaga
gcaatatttattggatcagtacctggaaaattcgaaggcgaggaagaaagctcttgggga
ttaggaaagttaaaaaagattctaaagatgttggaaaaagattcaaagaaggacgagaaa
actaaattcgaagagtctgacatttgtatttctcagtgtagttccatgggttcatttgga
cccaaacaggagtacattgccgaattaacggatggttttggttgccaacgagggaattgg
aaatttttatttccaacagtgaaagaagttcagcaatctatgttaggttggcaatctggt
tcctctattcatttcaacatcttggggaaaacagctgcaagccaagtggaaactttaaaa
aaaggtaagaatttatgcaaatgggtggccatgaaagctggtagacaaagagttgcacca
catattaaaacgtacatgcgattttcgaatgatggagaactactacgttgggtgcttgtt
actagtgctaatttgagtaaacccgcttggggaactttagaaggtcacaaggcaaaatca
agatcaacaagaggactcaggattcggtcctatgaagccggtgtattgttatatcccaaa
ttatttgaagaaagtcaacgcgctccttgcattatgactcctacttataagacgaatact
cccaatctggatgagaaaaggagagagttttatggaaaaagagtaattggtgtacgaatg
tgttgggatttcccacctgttgagtatgaagacaaggatgagatatggtcgcctgtgata
aatagaacggataaggactggttgggttatgtttggcctcccaattggtaa

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