Schizosaccharomyces pombe (fission yeast): 2539627
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Entry
2539627 CDS
T00076
Symbol
cdc27, SPOM_SPBC1734.02C
Name
(RefSeq) DNA polymerase delta subunit Cdc27
KO
K03504
DNA polymerase delta subunit 3
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03030
DNA replication
spo03410
Base excision repair
spo03420
Nucleotide excision repair
spo03430
Mismatch repair
spo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
2539627 (cdc27)
03410 Base excision repair
2539627 (cdc27)
03420 Nucleotide excision repair
2539627 (cdc27)
03430 Mismatch repair
2539627 (cdc27)
03440 Homologous recombination
2539627 (cdc27)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
spo01009
]
2539627 (cdc27)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spo03032
]
2539627 (cdc27)
03400 DNA repair and recombination proteins [BR:
spo03400
]
2539627 (cdc27)
Protein phosphatases and associated proteins [BR:
spo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
2539627 (cdc27)
DNA replication proteins [BR:
spo03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
2539627 (cdc27)
DNA repair and recombination proteins [BR:
spo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
2539627 (cdc27)
MMR (mismatch excision repair)
DNA polymerase delta complex
2539627 (cdc27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
2539627
NCBI-ProteinID:
NP_595419
PomBase:
SPBC1734.02c
SPBC1734.02c.1
UniProt:
P30261
LinkDB
All DBs
Position
II:complement(join(1061970..1062635,1062710..1062817,1062874..1062941,1062996..1063162,1063219..1063274,1063324..1063377))
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AA seq
372 aa
AA seq
DB search
MEEWRNFLDIKVINESSLVTVDNLSLQLDISSEKAQEYLNMFYQGNDFLYPIYLIHGQPI
DDEINLEIDEESQPISNFPVLQYILCDKSSLQEKQSRLKSGYKTVIFALSSAPLSDFDEL
LPAVYEIREKDVLYKKEDADKYGFIFNENSVPRVLKKAPSTHSPQLSVPSKTSTIDKTDT
RSTEKTKGKDIFSNARNQKGNSSRKNKKAPLENHKEKEPLLPKEEKLSEQAKRERDDLKN
IMQLEDESVSTTSVHDSEDDNLDSNNFQLEIGTEAKSAAPDEPQEIIKSVSGGKRRGKRK
VKKYATTKDEEGFLVTKEEEVWESFSEDENISTGTSNVVRNKPTTVNIATKKKNTAQSKP
QQKSIMSFFGKK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatggagaaacttcttagatattaaagttatcaatgaatcttcacttgtaact
gtagataatttaagtctgcaattggatatatccagtgaaaaagcacaagaatatcttaat
atgttttatcaaggcaacgattttttgtatcctatataccttattcatggacaacctata
gatgatgaaattaatttggaaattgacgaggaatctcaacctatatctaattttcctgtt
ttgcaatacattttgtgtgataagtcttctctacaagagaaacaaagtagattgaaaagt
gggtataaaactgttatatttgctctttcatctgctccattaagtgattttgacgaatta
ttacctgcagtatatgaaataagagagaaagatgttttatacaaaaaagaagatgctgat
aagtatggatttattttcaatgaaaattccgtgcctcgtgttttgaaaaaggcaccttca
actcattccccccaattatctgttccctcaaagacatcgacaatcgataagactgacaca
cgtagtacagaaaagactaaagggaaagatattttcagtaatgcaaggaaccaaaaggga
aactcatctcgtaaaaataaaaaagctcctcttgaaaatcataaagaaaaggagcctctc
ttgccaaaggaggagaagttgtctgagcaagcaaagagagagcgcgatgatctgaaaaat
attatgcagctagaagatgaatcagtatctaccactagcgttcacgattctgaagatgat
aatttagattctaataatttccaattggaaattggtaccgaagcaaaatctgctgcacct
gacgaacctcaggaaattatcaaatccgtatccggtggaaagagacgtgggaaaagaaaa
gttaaaaagtacgcgacaacgaaagatgaagaaggattcttggttactaaggaagaagaa
gtctgggaatcattttctgaagatgaaaacatctcaactggtacttcaaatgttgttaga
aacaaaccgactactgtaaacattgcaactaagaagaagaatactgcacaaagtaaacca
caacaaaagtctattatgtccttttttggaaagaaataa
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