Schizosaccharomyces pombe (fission yeast): 2539632
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Entry
2539632 CDS
T00076
Symbol
slm5, SPOM_SPBC1198.10C
Name
(RefSeq) asparagine--tRNA (Asn) ligase Slm5
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
2539632 (slm5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spo01007
]
2539632 (slm5)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spo03016
]
2539632 (slm5)
Enzymes [BR:
spo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
2539632 (slm5)
Amino acid related enzymes [BR:
spo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
2539632 (slm5)
Transfer RNA biogenesis [BR:
spo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
2539632 (slm5)
Prokaryotic type
2539632 (slm5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
Mcm2-like_OB_arc
Motif
Other DBs
NCBI-GeneID:
2539632
NCBI-ProteinID:
NP_595079
PomBase:
SPBC1198.10c
SPBC1198.10c.1
UniProt:
Q9P6I0
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All DBs
Position
II:complement(join(190207..191217,191288..191414,191489..191676))
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AA seq
441 aa
AA seq
DB search
MNKFQLPKTLKSLWHHPHNGELISINGWVRSIRKLKNVCFAMVSDGTCQQALQVVTSPEQ
SKKLSYGASVNIEGQLAVSKNAKLGLQQYELLAEKIKIYGQINDDNYPIQKKHLTTEMLR
QIPHLRLRTAKQGEIFRLRSDSLKALRQFFSSKDFTETNPPIITSSDCEGAGEVFTLTPQ
ETHKNKSFERDDQKHFFDRPAFLTVSTQLHLEALALGLSRVYTISPAFRAEQSHTSRHLA
EFWMLEAEVAFMTSLSQLTSLMEDMIKYTLNSLMEQNYHRDHWDQLLKPWKCMTYSEAIE
ELSAVKKTWKYPPKWGNDLSSEHEKYLCEILHKTPVFVTDYPQKIKPFYMKSSGPDTVAA
VDLLVPQVGELAGGSLRKDHLDEYKTYPPELQWYLDLMKYSNAPHGGFGLGIERLIAFLE
GENTNVKETIPFPRSVGSIFA
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaataaattccaactaccaaaaactttaaagtctttatggcatcacccacataatgga
gagttaataagcataaacggctgggtacgatctatccgaaaactaaaaaatgtttgtttt
gccatggtttctgatggtacatgtcaacaagcccttcaagtggtgacttcgcctgaacag
agtaagaagctatcatatggtgctagtgtgaatattgaaggccagttggcagtttctaaa
aacgcaaaacttggattgcagcagtatgaactgttggctgagaaaataaaaatttacggc
cagataaatgatgataactaccctattcagaaaaaacatttgactactgaaatgttacga
caaataccccatcttcgattacgaacagcaaaacaaggggagatttttcgtctccgttca
gattcattaaaagcattgcgacaatttttttcaagcaaagattttacagagaccaacccc
ccgataataacttcttctgattgtgaaggagctggtgaagtatttaccttgaccccccag
gagacgcataaaaataaaagttttgaaagagatgatcaaaagcatttttttgaccgacct
gcatttttaactgtatccactcaattgcatctagaggctctagcattaggactgtccaga
gtgtatactatatcgccagcatttagagcagaacaaagtcatactagtcgacatttggca
gaattttggatgctggaagcagaagttgcgttcatgacttcgctttcacaactaacatca
cttatggaggatatgattaaatatactcttaattcattgatggagcagaactatcacaga
gatcattgggaccaactgcttaaaccgtggaaatgcatgacatattctgaagcaatagaa
gaattaagcgctgtgaaaaaaacatggaaataccctcctaaatggggaaacgatttaagt
agtgaacatgaaaaatatctttgtgaaatcttacataaaactccggtattcgtgacggac
tatccacaaaaaattaaaccgttttatatgaaatcctctgggcccgatacagttgctgct
gttgatttactcgttccacaggtgggtgaacttgctggaggttctttacgtaaagaccat
ttagatgagtataaaacttacccaccagaacttcaatggtatttagacctaatgaagtac
agcaatgcgccacacggagggtttggcttagggatagaacgactgattgcttttctagaa
ggagaaaacacgaacgtaaaagaaactatacccttcccccgttcagtaggatccattttt
gcatga
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