Schizosaccharomyces pombe (fission yeast): 2539688
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Entry
2539688 CDS
T00076
Symbol
fan1, SPOM_SPBC146.06C
Name
(RefSeq) fanconi-associated nuclease 1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
2539688 (fan1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spo03400
]
2539688 (fan1)
Enzymes [BR:
spo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
2539688 (fan1)
DNA repair and recombination proteins [BR:
spo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
2539688 (fan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
FAN1_HTH
FAN1_TPR
DUF7440
Motif
Other DBs
NCBI-GeneID:
2539688
NCBI-ProteinID:
NP_595395
PomBase:
SPBC146.06c
SPBC146.06c.1
UniProt:
Q9Y804
LinkDB
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Position
II:complement(1010601..1012712)
Genome browser
AA seq
703 aa
AA seq
DB search
MKRFFNEACDINTPDKSGVNENKLCFPPLKVVCQAPETTVKGQVANTNKHNVYSTKNSMY
LLGFEEILNTVLDCEPHIFTDDELRVIENFKALDSDERYLFVRLFMRKRNKWFRVGHLTY
PDCKDVIACCKQLVLKNFFEDESLMSTEEIIEILSLDELRSLARQTKVCGKSRSEISKEI
IFLSKRQSVLHCNGQQFLSFDAFGVMHKQESFLRKQLLYQCKSCVKPKKILVDLFHRINI
VYFRSSIYDEQSLTSLILARLNKFSYPNYVLSRTSNVFNCRAQCLEYVEVLELSKNLVPI
FENTAASDKEALEQALNSFFEIYPIWSTYLNEDIREFWVEENRKVDTRLVRFSFSFRPGA
VYTYLIHKSLNILAKSRLVEVEHEILDTLLSQNIYLVGKRGHWYNRKALLEYNFKTEDTN
VLRYWKTLALSTCENGIEDKYTHLRYYFSLQRRLVRLRKCLKVSNTTELKSMKLINNNPS
RLFLHGERIHNGDLSNRTVWRSKTNNAITVEELALQHYQSIGWEGIHAESSILLTLFALT
FWDILFEDVPGVFQSPFQSAPLDLHTDSFYISRESTIMKRLEEIRNGKAGLIIKDNYIRE
HQRKTFCVGLNWSYTCEMLLEIVDCINDNGLAQIFLALTQDYKNSSSGIPDLCLWNPSKK
KFMFSEVKSDNDRLSEAQKFWISLLISSEVDVEVCHVSMHKKK
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgattctttaatgaagcgtgcgacataaacactccagataaatctggggtaaac
gagaacaagttatgtttccctcccttaaaagttgtatgtcaagcaccagagacaacagtt
aaaggacaagttgccaatactaataagcacaatgtatattctactaaaaattcaatgtat
ctgctggggttcgaagaaatcctaaacaccgtcctcgattgtgaaccgcatatctttact
gatgatgagttgagggttattgaaaactttaaagctttagactcggatgaacggtacttg
tttgttcgtctattcatgcgtaaaagaaataaatggttccgcgtgggccatttgacttat
ccagattgcaaggatgttattgcctgctgtaagcagcttgttctgaaaaatttttttgaa
gatgaatcactcatgtcaactgaagaaataattgaaattctatctctcgatgaattgcgt
tcgttagctagacaaacgaaggtgtgtggaaaaagcaggtctgaaatttcaaaagaaatc
attttcctatctaaaagacaatcagtactacattgtaatggtcaacaatttttgtccttt
gatgcttttggtgtgatgcataagcaagagtcgtttcttcggaagcaactattatatcaa
tgcaaatcctgtgtgaaaccaaagaaaattttagtagacctatttcatcgaattaatatt
gtgtactttcgttcgtccatttatgatgaacaatcgcttacgtctttaatattagcacgc
cttaacaaattttcctacccgaattacgttttatcgcgaacttcaaacgtctttaattgt
cgtgctcaatgccttgaatacgttgaggttttagaactttcaaaaaacttggttccaatc
tttgaaaacactgccgcttcggataaggaagcactcgaacaagcgttgaacagttttttt
gaaatatatcctatatggtcgacatatctaaatgaagacattagggaattttgggtggaa
gaaaatagaaaagtagatactcgattggtaaggttttcttttagctttcgtcctggtgct
gtttacacatacttaatacataaaagtctaaatattctcgcgaagtcgcgattagttgag
gttgaacatgaaatattagatacccttttatctcaaaatatatatttggtgggtaaaaga
ggacattggtataatagaaaagccttactggaatacaactttaaaactgaggatactaac
gttttgcgttattggaaaacgcttgctttatcaacttgtgaaaatggtattgaagacaag
tatacccacctcagatattactttagcttacaaaggagacttgttcgcttacggaagtgt
ttaaaagtctctaatactaccgaattaaaaagcatgaaacttataaataataatccttca
agactttttcttcatggtgaacgaatacataacggtgacctttcaaaccggactgtttgg
cgtagcaagactaataatgctatcacagttgaagagcttgctcttcaacattatcaatcg
attgggtgggaaggtatacatgctgaaagcagcattttgctaactttgtttgctttgaca
ttctgggatattttgtttgaggacgttcctggtgtttttcaatctccgtttcaaagtgca
cctttggatttgcacactgattccttttatatatctagagaatcgacaatcatgaaaaga
cttgaggaaataagaaatgggaaagctggcctaattataaaagataattatatcagagag
caccaaagaaaaacattttgtgtaggtcttaattggtcgtatacttgcgaaatgcttctt
gaaattgtcgattgtatcaacgataatggactcgcccaaatatttcttgctttgacccaa
gattataaaaatagttctagcgggatacctgatttatgtttgtggaatccgtctaaaaaa
aaatttatgttttcagaagttaaaagcgataatgataggctctcagaagcgcaaaaattc
tggatatcattactaatatccagtgaagttgatgttgaagtttgtcatgtctccatgcac
aaaaaaaaataa
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