Schizosaccharomyces pombe (fission yeast): 2539695
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Entry
2539695 CDS
T00076
Symbol
rns1, SPOM_SPBC13G1.14C
Name
(RefSeq) putative RNA-binding protein
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03013
Nucleocytoplasmic transport
spo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
2539695 (rns1)
03015 mRNA surveillance pathway
2539695 (rns1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spo03019
]
2539695 (rns1)
Messenger RNA biogenesis [BR:
spo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
2539695 (rns1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_ACIN1
Motif
Other DBs
NCBI-GeneID:
2539695
NCBI-ProteinID:
NP_596549
PomBase:
SPBC13G1.14c
SPBC13G1.14c.1
UniProt:
Q1MTR2
LinkDB
All DBs
Position
II:complement(join(3727332..3727657,3727705..3727810,3727877..3728068))
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AA seq
207 aa
AA seq
DB search
MYQKEAFYRGRSSTRQFNNTRSPSGRSASRSSNFSHRSSSRDSFSSNRSYSSSLSRSPEE
PLRTILVENLTRNVTKEHIAEIFGIYGLIDHIFMPIYKKSELNKGYCYIEYVYHDQAANA
VDKMNNAELDGEELFVSIKRFPFESLHKNHKHYENSYRPSRSQNNSHYNDKSFHRSRYSR
ARSRSPGSNISEYSDQSPPYHSYRHRP
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaaaaggaggccttttatcgtggacgtagctcaacaagacaatttaacaatacc
cgatctccatctggacgttcagcgtcgcgttcttccaatttctcacatcggtctagtagt
cgtgattctttttcctcgaatagatcttactcgagttcgctttccagatctccagaagaa
ccattgcgaacaattcttgtggaaaatttgacgcgtaatgtcactaaagaacatatagca
gaaatatttgggatttatggactaattgatcatattttcatgccaatttataaaaaatct
gaattgaataaagggtattgctacatagaatacgtataccatgaccaggccgcaaacgcc
gtcgataagatgaacaacgctgagcttgatggtgaggagttgtttgtatcgataaaacgt
tttccttttgagtcactacacaaaaaccataagcactacgaaaactcgtatcgaccatca
aggtcacaaaacaattcacattacaacgataaatcgtttcatcgctccagatattctcgg
gcacgtagccgatctccaggttccaatatatctgaatattctgatcaatcacccccctat
cactcctatagacatcgtccttaa
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