Schizosaccharomyces pombe (fission yeast): 2539705
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Entry
2539705 CDS
T00076
Symbol
rav1, SPOM_SPBC1105.10
Name
(RefSeq) RAVE complex subunit Rav1
KO
K24155
rabconnectin-3a
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
2539705 (rav1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spo04131
]
2539705 (rav1)
Membrane trafficking [BR:
spo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
2539705 (rav1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
2539705 (rav1)
RAVE complex
2539705 (rav1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
Motif
Other DBs
NCBI-GeneID:
2539705
NCBI-ProteinID:
NP_596466
PomBase:
SPBC1105.10
SPBC1105.10.1
UniProt:
Q9Y817
LinkDB
All DBs
Position
II:join(3524673..3524759,3524875..3528681)
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AA seq
1297 aa
AA seq
DB search
MPLAFTNPGTPLKRTAAYDNVQWNQNRILTFGTRYTVLIIVNNYESYQNIQFGESIGAVA
LDQRTGFLAIAHGQVLDIYKPADSLKWTHHYNYITQLSEDITQLSWGYNFDLLLCASSYT
KLINFSEDKPRLVWSQNRISDSFLSSTISSDACFIASIETKNPLAKVWQRTSPQGTVSSC
DDFSYLVHPCRVRFSQWSKHLHPDASGSTPFLSTVGYDNVLRIWQVGSRFGSQLMHLSCF
LNLRKYYKSDQPPYCCFIDKDDFTIALAHAISRHSGQVHKDRILNRLLALASGQPHIFLL
FTFECLYIFSLVIDQETLSSFELINQVPTNFPKGALQPDGFIPIYRTSKHEFYDYNIILF
FQNSAREYMFSLTDFFYSDFELRVSYDFYGHDYPIKSLTRTSNGHGIVSRDVNRICMFQS
YISQDGKNQLICRFRLLLGESDFILPLYAGEYAAVLNLNSLKLWHCNEAIPPTLLCTCRQ
VPTSPIITFFILPVQNNDNSALCALTEGGHAWFWSVSNEAHDGSAVLRFIDRVNFTKNLN
IASAVDVMGWSSTLNLSSLSSFDQEVFQSISKDGLLQTWMARVLGDDKAEISEISKVQTS
IKSATMIKGSTSKKVAVVSENNRRLSIFDTRSSEFSEKEEFSSVFDDYGPINDLDWTSTP
NSHSILAVGFLHDVILLCQNRRSYMNDIPCWSRIRRYNLLEYTNSLISDSSWLDNGTLVT
AIGNGLFYFDNSLPEDQSLLFPASLKRSAKNIFDLAYQLNGILPVFHPQLLQQLLLRNQP
FLFTNILLRFYLCLKDDVDMHFLLNMDCSEFYCCDEEISKDLLIKSLSQNSAEILNPAEL
DFEETSVSKHLGLYIDEMIKKLTALLKVKKVKTLTRSSQFLLLNLIEAFNKARALRDSLD
LNGKRYCIMLNQYVLSKHQRQLTSLPTREMAWAFHSSNKAVLLDHTKKLHGKPLLWNAVE
EYAIPFWLNEQLLKDVFLELSRNHYAEIDDRNPENVSLYHIALHKINVFRDLWRLASWHK
ESARTVKLLSNDFSKKKWKVVASKNAFALLSKHRYFYASAFFLLADSCYDAAKVCIRNLK
SISLAIAMTRVYEGDDGPTLKRLINEYVLPLAVSQNDRWLTNWSFTILKQEKKALQSLVS
PIRSLVSDNDFIQLYTSDKNDQEIHENKDSQRNSTNEPVRNKFPSDDPAFILLYECLRSS
NVQIDESLEYRFVLHNANVYCQLGCDLIALGLLRNWKFQKNPATAHLETEDYMVTDKQSA
VEKTHDSPKLGKTLMGQDIRPTPDDVPEFNESAFSFE
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atgcctctggcattcacaaatcccggtacacctctaaaacgtacagctgcctacgacaat
gtacaatggaaccaaaatcgaatattaacatttggaactcgctataccgtattaattatt
gtaaataactacgaatcttatcaaaatatacaatttggagagtctattggtgcagtggct
ttggaccaacgtacggggtttctagcaatagcacatggacaagttttggatatttataag
cccgccgattctttgaaatggactcatcattacaattatataactcagctttctgaagat
attactcaactatcttggggatacaattttgatctgttgctttgtgcttcgtcatacact
aaacttataaatttctctgaagacaaacccaggttggtttggtcgcagaacagaatctcg
gattcattccttagtagcactatttcttccgatgcttgttttatagcttctatcgaaaca
aaaaatccacttgctaaagtttggcagcgaacatctcctcaaggtacagttagctcatgt
gatgatttcagctatcttgttcatccttgtcgcgtaaggttttcccaatggtctaaacac
cttcatccggacgccagtggatcgactcccttcctgagtacggtaggctatgataacgtt
ctaagaatttggcaagttggtagccgatttggttctcaattaatgcatctttcttgtttt
cttaacttgagaaaatactacaaatctgatcaaccaccatactgctgttttattgataag
gacgattttactatagcattagcacatgctataagtcgccattctggtcaagtgcataag
gatcgcattttaaataggcttctggctttggccagtggacaaccacatatatttttgcta
tttacttttgaatgtttgtacatattttctctagtaattgaccaggaaactttgtcatct
tttgagcttattaatcaagttccaacgaactttcccaaaggcgctcttcaacctgacgga
tttatacctatttacaggacctcaaaacacgaattttacgattataacatcattttattt
tttcaaaattccgcccgtgaatacatgtttagtcttaccgatttcttttatagtgacttt
gagttaagagttagttacgatttttatggacatgattatcccataaaaagcttaacaaga
acctctaatggtcatggaattgtatcccgagatgttaatcgtatctgtatgtttcaatca
tacatatcgcaagacgggaaaaatcagttaatttgcaggttcagattattacttggagaa
tctgactttatattacctctttatgctggtgaatatgcagcagtactcaacttaaattct
ttaaaattatggcattgcaatgaagcaattcctccaacccttctctgtacatgtcgtcaa
gtccctactagtccgataataaccttctttattcttcctgttcaaaacaacgataattcc
gccctatgtgctttgacggaaggaggccatgcctggttttggagtgtctctaacgaagct
catgatggttctgctgtacttcggtttatagatcgggtaaattttacaaagaatttaaat
atcgcatcggctgtagatgtcatgggttggtcttctactttaaatttgagcagtttatct
tcatttgatcaagaggtatttcaatcaatatcaaaagacggtttattacagacttggatg
gcaagagtattgggagacgataaagcggaaatatcggaaatttccaaagtgcaaactagc
atcaaatctgcaactatgatcaaaggctcaacatccaagaaagttgctgttgtatctgag
aacaatcgtcgactttcaattttcgacacgcgtagttcagaattctctgaaaaggaagaa
ttttcctctgtttttgatgattatggaccaataaatgacttggattggacttctactccc
aattcccattctatcttggctgttggctttctacatgatgttattcttttgtgccaaaat
cgccgatcttatatgaacgatattccatgttggtctcgtattcgtagatacaatctttta
gaatatacaaattcattaatatctgactcttcttggttggataatgggactttagttact
gccattggtaacggacttttttattttgataattcacttcccgaagatcagtctttactg
ttccctgcatcattgaaacgttccgcaaaaaatatttttgatcttgcataccagcttaat
ggaattttaccagtttttcatcctcaattgttgcagcagcttttacttagaaaccaaccc
tttctatttactaatattttgctaaggttttacttgtgtttgaaagatgatgtagatatg
cattttctcttaaatatggactgcagtgagttttactgctgtgacgaagaaatttctaaa
gaccttttaataaaaagtctcagccaaaattctgcggaaattctaaatcctgcggaattg
gattttgaagagaccagtgtctcaaagcatttaggattatacattgatgaaatgataaag
aagttgactgcattattaaaagtaaagaaagtcaaaaccctcactcgatcatctcagttt
ttacttcttaatttaatcgaggcattcaataaggcaagagcattgcgagattcattggac
ctcaacggaaaaagatattgcattatgctaaaccagtacgttttatcaaaacatcaacgt
caattaacaagcttgcccacccgagagatggcgtgggcttttcatagctctaacaaagct
gttctgttggaccacactaaaaagcttcatggaaaaccattgttatggaatgctgttgaa
gaatatgcgataccgttttggctaaatgagcagctactgaaagatgtatttttagagctg
tctcgcaatcattacgctgagattgacgataggaacccagagaatgttagtttatatcac
attgctctacacaaaataaatgtatttcgtgatctttggcgtcttgctagttggcataag
gaatcagctcgaacggttaagttgctttcgaatgacttttcaaaaaagaagtggaaagtg
gttgcatccaagaatgcttttgcacttttaagcaagcacagatatttttatgcttctgca
ttttttcttttggcagatagttgctatgatgccgcaaaagtatgtatccgtaatttaaaa
agcatttcattagccatcgcaatgactcgagtctatgaaggcgacgatggtccgacctta
aagaggctaataaacgagtatgtacttcctttggctgtatctcaaaacgatagatggctc
accaattggagtttcactattttaaaacaggaaaaaaaggccttgcaaagtttggtatct
cccattcgctcgctggtcagcgataatgactttatacaactttatacatccgataaaaac
gaccaagaaattcacgaaaataaagattcacaacgaaatagtactaacgaacccgtacga
aataagtttccgtctgatgatcctgccttcattttgttatatgaatgtttaagatccagc
aacgtgcaaattgatgaaagtcttgaatatcgatttgttttgcataatgctaatgtgtat
tgccaattaggatgtgacctaatagcacttgggcttttgcgtaattggaaattccaaaaa
aatcctgcaactgctcatcttgaaactgaggattatatggtaactgacaagcagtctgca
gtggaaaaaactcacgactcccccaaacttggaaaaactcttatgggacaagatatccgg
ccaacaccggacgatgtccccgaatttaatgaatctgcgttcagcttcgagtaa
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