Schizosaccharomyces pombe (fission yeast): 2539733
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Entry
2539733 CDS
T00076
Symbol
pab2, SPOM_SPBC16E9.12C
Name
(RefSeq) poly(A)-binding protein Pab2
KO
K14396
polyadenylate-binding protein 2
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
2539733 (pab2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spo03019
]
2539733 (pab2)
Messenger RNA biogenesis [BR:
spo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
2539733 (pab2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
DivIC
EBNA2_Core
Flagellin_C
COG6_N
PEARLI-4
ODF2_N
Kebab_C
TolA_bind_tri
FapA
DUF724
PilO_N
Motif
Other DBs
NCBI-GeneID:
2539733
NCBI-ProteinID:
NP_595794
PomBase:
SPBC16E9.12c
SPBC16E9.12c.1
UniProt:
O14327
LinkDB
All DBs
Position
II:complement(join(1940094..1940216,1940273..1940360,1940416..1940669,1940721..1940756))
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AA seq
166 aa
AA seq
DB search
MSDQDALDTQEKELLEMKERVAEMEAEAAKLRAMQEQLDNETEALRNDKESIDAQSVYVG
NVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPNALLLNGSML
HERPLKVTPKRTNVPGMSRGRGRGRGRGRGRGRGGYRGRARGFAPY
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcaagatgccttagatacccaagaaaaggaactattggaaatgaaagagcga
gttgctgaaatggaagcagaggctgcaaagcttcgtgccatgcaagaacaactagataat
gaaacggaagctttgagaaacgataaggaatccattgatgctcaaagtgtctatgttgga
aatgttgattacagtgttactccagaggagttgcaaagtcattttgctagttgtggatct
gttaatcgcgttaccattttgtgtgacaagtttacgggacatccaaaaggatttgcatac
atcgagttcagtgaaccaagcttagtgcctaatgctcttttattaaatggatcgatgttg
catgaacgacctttaaaggttacacccaagcggacaaacgttcctggtatgagccgtggt
cgtggtcgcggacgtggacgtggacggggtcgtggcagaggaggatatcgtggaagagcc
cgtggtttcgctccgtattag
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