Schizosaccharomyces pombe (fission yeast): 2539775
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Entry
2539775 CDS
T00076
Symbol
spt8, SPOM_SPBC14C8.17C
Name
(RefSeq) SAGA complex subunit Spt8
KO
K11360
transcriptional activator SPT8
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spo03021
]
2539775 (spt8)
03036 Chromosome and associated proteins [BR:
spo03036
]
2539775 (spt8)
Transcription machinery [BR:
spo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
2539775 (spt8)
Chromosome and associated proteins [BR:
spo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
2539775 (spt8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_SPT8
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
EIF3I
WD40_RFWD3
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
NBCH_WD40
AAL_decarboxy
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
2539775
NCBI-ProteinID:
NP_595920
PomBase:
SPBC14C8.17c
SPBC14C8.17c.1
UniProt:
O60097
LinkDB
All DBs
Position
II:complement(join(2234083..2235608,2235656..2235710))
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AA seq
526 aa
AA seq
DB search
MEAEESESFSYPMLLPSDGLYPEDDDDADMDQDKNPEENVMNEKEDEDVDAVDEKSGEED
VEMDTMEDENENDEDTEQTSEKKETEETPKENPLEKLKQKASTASFYDVVPTLAIPMATS
INAFAFTSDLKWLFTGGEDGYIRKYDFFPSINGDLSLTVAQRHPFVDTVTKAGILLNYWE
NAYDGNKPSSVYSLAAHSRGLWVLSGVNNGDIILYSTRHQEGYPVTSLKKHTAPVSCLAL
HGSEKKVLSGSWDKMVYYWDLNTGDAISTYNCESGQISNIVYRPSGAVNPWGSESDDMRS
LFGTPASSSSYDALFDEEVEKAIEEETKSVQANEENETEKPSQTESTTNNDNIKAPSESS
SEESNIFLTTSIDGVMNVWDHRMVDSVLKYPVPKGVPPWAMSACWSPDGNNIYIGRRNGI
VEEYNIHSGKEPVRSLKMPLDSGPVSNVYSMPNGRHLVISSFDNIRLYDLQSKAGIGFLI
IPGHHGGLVSSLYVDTSCQFMFSASGNRGWQGTTTEVFLGYQIMTS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagaagagagtgagtccttttcatatccaatgttgctaccttctgacggactt
tatccagaagacgatgatgatgcggatatggatcaggataaaaatcctgaagaaaatgta
atgaacgaaaaagaagatgaggatgtagacgcggttgatgagaagtccggtgaagaagac
gtggagatggatacaatggaagatgaaaacgaaaacgatgaagatactgagcaaacctct
gaaaagaaggaaactgaagaaacaccaaaggaaaatccacttgagaaattaaaacaaaag
gcttcaacggccagcttttatgatgtggtgcctaccctggcaatccctatggctaccagc
ataaacgcatttgctttcacatcggatttaaaatggcttttcactggtggggaagacgga
tatataaggaagtatgatttttttcctagcattaatggtgatctctccctgactgttgca
cagagacatccctttgtggatacagtaacgaaggctggaatattactcaactactgggag
aatgcttacgatggaaataaaccatcttcggtatatagccttgcagctcattccagaggt
ctttgggttctttcgggcgtcaataatggagatattatactgtactctacaagacatcaa
gagggttatcccgttacttctttaaaaaagcatacggctcctgtttcgtgtttagcatta
catggttccgagaaaaaagtattgagtggaagctgggacaaaatggtttattactgggac
cttaacactggtgatgcaatatctacatacaattgtgagagtggtcaaatttcgaatata
gtttatcgtccatcaggcgctgtaaatccttggggttctgaatcggacgacatgcgtagt
ttgttcggtacacctgcgtcttcctcttcttacgatgcactgtttgatgaagaggtggaa
aaagccattgaagaagaaactaaatctgttcaagcaaatgaggagaacgagacagaaaaa
ccctctcaaaccgaatctactactaacaatgacaacataaaagctccttccgaatcttca
tccgaagagtccaatattttcttaacgacgtctatagatggagttatgaatgtatgggac
catcgcatggtcgattctgttctcaaataccccgtccccaagggtgtaccaccatgggct
atgtctgcatgttggagtccggatggaaataatatatatattggccgccgaaatggaatc
gtcgaagaatataacattcactctggcaaggagcctgttcgctctttaaaaatgcctctc
gattcgggtcctgtttcaaatgtctattcgatgccgaatggccgtcaccttgtaatttcc
tcctttgataatatccgcctttatgatcttcaaagcaaggccggcatagggttcttaatt
attccaggtcatcatggaggtcttgtcagttcgctttatgtagacacttcttgtcaattc
atgttttcagctagtggaaatcgaggatggcaaggaactactactgaagtgttcctcgga
taccaaataatgacttcataa
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