KEGG   Schizosaccharomyces pombe (fission yeast): 2539794
Entry
2539794           CDS       T00076                                 
Symbol
rpb8, SPOM_SPBC14C8.12
Name
(RefSeq) DNA-directed RNA polymerase subunit Rpb8
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo03020  RNA polymerase
spo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    2539794 (rpb8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    2539794 (rpb8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spo03021]
    2539794 (rpb8)
   03400 DNA repair and recombination proteins [BR:spo03400]
    2539794 (rpb8)
Transcription machinery [BR:spo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     2539794 (rpb8)
  RNA polymerase III system
   RNA polymerase III
     2539794 (rpb8)
  RNA polymerase I system
   RNA polymerase I
     2539794 (rpb8)
DNA repair and recombination proteins [BR:spo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      2539794 (rpb8)
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 2539794
NCBI-ProteinID: NP_595915
UniProt: Q92399
Structure
LinkDB
Position
II:join(2223772..2223841,2223901..2224102,2224151..2224256)
AA seq 125 aa
MSESVLLDEIFTVTSVDKQKYQRVSRITAVSGQNDMNLTLDINSQIYPLEKDATFSLQIT
SNLNSPDLKEAADYIMYGKVYRVEEAKDEKVSVYVSFGGLLMAIEGSHRKLYRLSLDHVY
LLLRR
NT seq 378 nt   +upstreamnt  +downstreamnt
atgtcggaatccgtacttttagatgagatttttacagtcacttcagttgataaacaaaag
tatcaaagagtttcacgaattacggctgtctcaggccaaaatgacatgaatcttactctt
gacattaattcgcaaatttatcctttagaaaaggatgcaacctttagtttgcaaatcaca
agcaatttgaatagccctgatttaaaggaagctgctgattatattatgtatggaaaagtc
tatcgggtggaagaagctaaagatgagaaagtatctgtttatgtaagctttggcggttta
ttgatggcaattgagggctctcatagaaaattgtatcgtttgtcattagaccatgtttat
ctattacttagaaggtaa

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