Schizosaccharomyces pombe (fission yeast): 2539829
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Entry
2539829 CDS
T00076
Symbol
nup85, SPOM_SPBC17G9.04C
Name
(RefSeq) nucleoporin Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
2539829 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spo03019
]
2539829 (nup85)
03036 Chromosome and associated proteins [BR:
spo03036
]
2539829 (nup85)
Messenger RNA biogenesis [BR:
spo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
2539829 (nup85)
Chromosome and associated proteins [BR:
spo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
2539829 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
DUF7032
Motif
Other DBs
NCBI-GeneID:
2539829
NCBI-ProteinID:
NP_595893
PomBase:
SPBC17G9.04c
SPBC17G9.04c.1
UniProt:
Q9UUE5
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All DBs
Position
II:complement(2174101..2176128)
Genome browser
AA seq
675 aa
AA seq
DB search
MESSDEVDLPVYHLQNAPIENGKLNDWRSKGRTVAFKLHPFLRKGLAYINNKEFDENTLK
SDKFEEVESLVYEFSTPSTLIEPNYLLTAWHELWEELQDTYMTPILDSEANLLLLTQFYG
KISSLFRSKIIQVLEELQSRINEGEKDCQPVLDSLWEVESAWRCAEAIYFPPSSPYTLST
GILDWVNAYDPQPIADDGLEIMAYRIPYQHPEFWPYVNKTAIRGLFEQTISCLEMSGLTK
EWPVLKETVDELIDILRYSPCTHQKRIRSVSDFERRWKLWRSRLANLRHVVKKHRDIDSE
VLDDFVVLLDILNGNKEVIMLSCAHWQEYFSALAFLYGPLDCKNPEDISLLYQLATGEDS
KFYVNGTIEYEQICVNLCSNEPLNAIKHAYLLDLGLAVHLADLLSKSGHLRDYITEEYPI
TLREHLILEYGQCVLESRNLWQTSFAYWKCVADSGYQRIKACIPYVPLSDVDAKETALQL
CKQLKLRDEAQLVLTHWADELIARNHYGEALIALDNAANYSALNRVTWELFDICIAEKKS
FSPDKDELLYELFSSPKACTPTLASIISPAATIHQYFFYLQHKKELNASELLVGLLTMVD
FPSSRFPKLLELLHEFLNNPLQSNSTDFKLSLVNVYDCIAVLQDQQSTVKDQQLLLSIHE
RLSSAISWYFLHLKK
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggaatcttcggatgaagtggatcttcctgtttatcatttacaaaatgcacctatagaa
aatggaaagttgaatgactggcgttcaaaaggccgaacggtagccttcaaattgcatcct
tttttgagaaaaggactagcgtacattaataacaaagaatttgacgaaaatacgttaaag
tctgataaatttgaagaagtagaatctctggtgtatgaatttagtactccttctactcta
attgaaccaaattaccttttgaccgcatggcatgaattatgggaagaattacaagatacc
tatatgactcctatcttggacagcgaggcaaatttgcttttgttaacgcagttttatggg
aaaataagctcgctcttccgctctaaaattatacaagttttagaggagttgcagtcgcgt
attaacgagggtgaaaaagattgtcagcctgttttggattctttatgggaagtggaatca
gcttggcgctgtgctgaagctatttatttccccccttcttctccttataccttatcaaca
ggaattttagattgggtaaatgcctatgatccacagcctattgccgatgatggactcgaa
atcatggcttatcgtataccttaccaacatcctgaattttggccttatgttaataaaaca
gctattcgtggactttttgaacaaactatatcatgcctcgagatgtccggtttaacgaag
gagtggcctgtacttaaagaaacagttgacgaacttattgatatattacgttacagccct
tgtacgcaccaaaagagaattaggtcggtttccgattttgaaagacgatggaaactgtgg
cgatcacgcttggctaacctcagacatgtggttaagaaacatcgggatattgattcggaa
gttttggatgattttgttgttttgcttgatattttgaatggaaataaagaagtcatcatg
ttaagttgcgcacactggcaggaatatttttcagctttagcatttttatatggtcctttg
gattgtaaaaatcctgaagatatatctctattatatcaacttgcaactggagaagactca
aagttttacgttaatggaacgattgagtatgaacaaatatgcgttaatttatgcagtaat
gaacctcttaacgctattaaacacgcctatcttctagatcttggactagccgtgcattta
gcagacttattgagtaaaagcggtcatttgcgggattacataaccgaggaatatcccatt
accttacgtgaacatcttatactggaatatgggcagtgtgttttagaaagtagaaatctt
tggcaaacgtcctttgcttactggaaatgtgttgctgattccggctatcaacgaataaaa
gcttgtattccatatgtccctctttccgatgtggatgccaaggaaactgcacttcaatta
tgcaagcagcttaaactaagggacgaagctcaattagtattgactcattgggctgatgaa
ttaattgcacgtaatcactatggtgaagcactaattgctttagataatgctgcgaactat
tctgctttaaatcgcgttacttgggaattgtttgatatatgtattgcagaaaagaagtca
tttagtcccgataaagatgaactgttgtatgaattgtttagctctcctaaagcctgtacc
ccgacccttgcctcgataatatctccagctgctacaattcatcaatattttttttacctt
cagcacaaaaaagagctcaatgcctctgaacttcttgttgggttactaacaatggttgat
ttcccttcaagtcgattccctaagttattagaactacttcacgaatttttgaataatcct
ttacagtctaactcgacagattttaagctttctcttgttaatgtttatgattgtatcgct
gtcttacaggatcaacagtcaactgtaaaggaccagcagcttttactatccattcatgag
cgtctttcttctgcgatatcatggtattttcttcacttaaaaaaataa
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