Schizosaccharomyces pombe (fission yeast): 2539881
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Entry
2539881 CDS
T00076
Symbol
top3, SPOM_SPBC16G5.12C
Name
(RefSeq) DNA topoisomerase III
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03440
Homologous recombination
spo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
2539881 (top3)
03460 Fanconi anemia pathway
2539881 (top3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spo03032
]
2539881 (top3)
03400 DNA repair and recombination proteins [BR:
spo03400
]
2539881 (top3)
Enzymes [BR:
spo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
2539881 (top3)
DNA replication proteins [BR:
spo03032
]
Eukaryotic type
DNA Topoisomerases
2539881 (top3)
DNA repair and recombination proteins [BR:
spo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
2539881 (top3)
FA (Fanconi anemia) pathway
2539881 (top3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Motif
Other DBs
NCBI-GeneID:
2539881
NCBI-ProteinID:
NP_596761
PomBase:
SPBC16G5.12c
SPBC16G5.12c.1
UniProt:
O60126
LinkDB
All DBs
Position
II:complement(join(4233935..4233979,4234081..4234816,4234864..4235000,4235051..4235543,4235633..4236009,4236057..4236137))
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AA seq
622 aa
AA seq
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MRVLCVAEKNSIAKSVASILGGGHVRRRDTRSKYVKNYDFSFNFGGNVGSSDVTMTSVSG
HLTEASFPSEYSSWSSVPQDVLFDAQIITSVSKNAEVLADNIKKEARNAQYLYIWTDCDR
EGEHIGVEISNVARASNPSIQVIRADFNNLERSHIISAAKRPRDVSKNAADAVDARIELD
FRLGAIFTRLQTIQLQKSFDILQNKIISYGPCQFPTLGFVVDRWQRVEDFVPETYWHLRF
VDKRQGKTIQFNWERAKVFDRLTTMIILENCLECKTAKVVNITQKPKTKYKPLPLSTVEL
TKLGPKHLRISAKKTLELAENLYTNGFVSYPRTETDQFDSSMNLHAIIQKLTGAQEWDSY
AEGLLAGDYRPPRKGKHNDRAHPPIHPVQMVHRSALPSQDHWKVYELITRRFLACCSDNA
KGAETLVQVKMEEELFSKKGLLVTEKNYLEVYPYEKWESSDQLPEYRLHEEFQPHILDMM
DSSTSSPSYITEPELIALMDANGIGTDATMAEHIEKVQEREYVIKRKKRGQGVTEFVPSS
LGVALAKGYDEIGLEWSLTKPFLRKEMEVQLKNIENGQLNRNVLVHMILTQFRDVFHLTK
QRFDCLKNSCRVYLMSHNEPQT
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcctatgtgttgctgaaaaaaactcgattgccaaatcggtagcaagcattcta
gggggtggacacgtgagaaggagagatacacgaagtaagtatgtaaaaaattacgacttc
tcatttaattttggaggcaatgttggatcttctgatgttacaatgacttctgtatccggt
cacttaacagaagcttcttttccttctgaatattctagttggagctctgtccctcaagac
gttttattcgatgctcaaatcatcacctcagtatcaaagaatgcagaagtactagcagac
aatattaaaaaagaagctagaaatgcccagtacctttatatttggaccgattgtgatcgt
gagggtgaacacattggggtggaaatctccaatgtagctagagccagcaatccatctatt
caggttatccgagcagacttcaataatttggaacggtcacatattatcagtgccgcgaaa
cgtccaagagatgtttcaaaaaatgctgcagatgctgtggatgctagaattgaacttgat
tttcgtttaggtgcaatattcactcggctacaaactattcaattacaaaaatcattcgat
attcttcagaataaaataataagttatggtccctgccaattccctacattaggctttgta
gttgatcggtggcagcgagtagaagactttgtgcctgaaacctactggcaccttcgattt
gttgataaaagacagggtaagactattcagttcaattgggaaagggccaaagtttttgac
agattaactacaatgatcatcttggaaaactgtttagaatgcaaaactgctaaggtcgtt
aacataactcaaaaaccaaaaaccaagtataaacctctgccattatcaactgtagaactt
acaaaactggggccaaaacatctaagaatttctgctaagaaaactttagagctcgccgaa
aacttatatactaatgggtttgtttcttacccacgtactgaaaccgaccaatttgactct
tcaatgaatttgcatgcgattatccaaaaactaacaggtgcacaagaatgggactcttat
gcagaagggcttttggctggagattatcgaccgccccgaaaaggtaaacacaatgatcgc
gctcatccacctattcatcccgttcaaatggttcaccggtcagcgcttccttcccaagat
cattggaaagtatatgagctaattacaagaagatttttagcttgttgttctgacaatgcc
aaaggagccgaaacgttggtgcaggttaaaatggaagaagagcttttttctaaaaaggga
ttgctagtgacagagaaaaattatttagaggtttatccatatgagaaatgggaaagttcg
gatcaattaccagagtatagacttcacgaggaattccaaccccacattctcgacatgatg
gacagttcaacgtcctccccttcctatatcactgaaccggagttaattgccttgatggat
gccaatggaatcgggacagatgctactatggcagagcacatcgaaaaagttcaggagaga
gaatatgtcataaaacgaaaaaaaaggggccaaggtgtaactgaatttgtaccaagctct
ttaggagttgctttggcaaaaggctatgatgaaattggtttagagtggagtttgaccaag
cctttcttgcgaaaagaaatggaagttcaacttaaaaacatagaaaatggccaacttaat
cggaatgttctagttcatatgatccttacccaattccgtgatgtttttcatctcacaaag
caaagattcgattgtttaaaaaatagttgcagagtctaccttatgagtcataatgaaccg
caaacctag
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