Schizosaccharomyces pombe (fission yeast): 2539949
Help
Entry
2539949 CDS
T00076
Symbol
mlh1, SPOM_SPBC1703.04
Name
(RefSeq) MutL family protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03430
Mismatch repair
spo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
2539949 (mlh1)
03460 Fanconi anemia pathway
2539949 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spo03400
]
2539949 (mlh1)
DNA repair and recombination proteins [BR:
spo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
2539949 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Mmc1_C
Motif
Other DBs
NCBI-GeneID:
2539949
NCBI-ProteinID:
NP_596199
PomBase:
SPBC1703.04
SPBC1703.04.1
UniProt:
Q9P7W6
LinkDB
All DBs
Position
II:join(2921241..2921312,2921441..2921578,2921644..2921816,2921864..2923535)
Genome browser
AA seq
684 aa
AA seq
DB search
MDVNSRAKIRPLDQLVINKIAAGEIIERPENAIKELIENSLDAGSTSIDVLLKDGGLKLL
QITDNGSGIQYDDLPYLCQRFSTSKIDNFNDLQHLQTFGFRGEALASISHVAKVTVVTKL
SSDIHAWKAFYVDGALAPISPGMSPAPQPCAGKQGTVITAEDLFYNVRSRKSALKNGSEE
FRRIMILVQKYAIHNDQVSFNCKKVGDTVASLSLSSRLSKADKIRHIYGPRVASHLRDFS
LGEGQSSIVGFSANGFISNADFQDKKSNLILFINNRLVESVELRHALEETYAKYLHKGAS
YFVYLSLNMSPEQLDVNVHPSKRIVHFLYDQEIATSICDKLGEILERTDTERSYPLQAMI
PSISNTKNAESSSQKAVRTYENYLVRTDPRERSIKSMLSDNFLQRSSNNYDNEIIEKVDS
ANSNKNATNDIKDLQTEEIVEEGNSIDLESIKSLQKQVINSMHVLATNILTEHKYVGLVC
PTRRIAAVQHNIGLYVVDYGKLSYHLFYQICLTEFGNYGEFVLETPLSISDLFEIVNGDE
DKSESEKFTRLLVSRRDMLKDYFSISVTSGGLLTAVPMLSPKYHPPFEQLPLLISSLTPK
FFDWLDEKSCLNGIMKAIAKFYVPLPLSYEESDVKSIRSLESCLEDYLFPEFRRRVICPK
KVFEEKCIYQITSLPRLYNVFERC
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaattcacgagcaaaaattcgtcctttggatcaattggttattaacaaaata
gccgcaggggagattatagaaagacctgaaaatgctattaaagagttaattgaaaattca
cttgatgctgggagtacaagcattgatgttttgctaaaagatggcggcttgaagcttctt
caaattactgacaatggatctggtatacagtatgatgatcttccttatttatgccagagg
tttagtacgtctaaaattgataattttaatgatttacaacatttacaaacatttggattt
cgtggagaagcacttgcgagtatcagtcatgtcgcgaaagttacagtagtaacaaagctt
tcttcggatatacacgcatggaaggctttttatgttgatggagctcttgcgcccattagc
cctggaatgagtcctgctccccaaccttgtgctgggaagcaagggactgtaataacggct
gaagatttattttacaatgtacgtagtcgcaaatcagctttaaaaaatgggtcagaggaa
tttcgtcgcataatgatcttggttcaaaaatatgcaattcataatgaccaagtttcattc
aactgtaagaaggttggtgacaccgttgcctctttatctttaagctctaggctttccaaa
gcggataaaattagacatatttatggaccaagagtggctagtcatttgagagatttttct
ttaggagaaggacaatcgtctattgttggattttcggccaatggttttattagcaatgca
gactttcaagataaaaaaagcaatttaattttatttattaataatcgattagtggaatcg
gttgaactgcgacacgctcttgaggagacttatgctaaataccttcataaaggagcatct
tactttgtttacttatcgttaaatatgagtcctgagcaattggatgttaatgtccatcct
tcgaagaggattgttcattttttgtatgaccaagagattgcaacttctatctgtgataaa
ctaggtgaaattttggaacggacggacactgaaaggtcgtatcctttgcaagcaatgatt
cctagcatctctaataccaaaaacgctgaaagctctagtcaaaaagcagtgcgaacctat
gaaaattatttggttcgtacagatccgcgtgaaagaagtattaaaagtatgctttcagat
aactttttgcagcgatcatcaaataattatgacaatgaaataattgaaaaagttgattcg
gccaactcgaataaaaatgcaacaaatgacataaaagatcttcaaactgaagaaattgtt
gaagaagggaattctattgatttggaaagcatcaagtctttacaaaagcaagttataaat
tcaatgcatgtcctggcgactaatattcttacggagcataagtatgtaggtttagtttgt
cctacaagaagaattgcggcggttcagcataacataggtttatatgtggtcgactacgga
aagctttcatatcatctgttttatcagatttgtctcactgaatttggaaattacggcgaa
tttgtactcgaaacacctttgtcaatttccgatttatttgaaatagtcaatggtgatgaa
gacaaatctgaaagtgaaaaatttacacgtttattagtttcccgacgagatatgttaaag
gactacttttctataagtgtcacgtcaggtggattattgacagctgtaccgatgttaagt
cctaaatatcatccaccttttgagcaacttcctttgttaattagtagtttgactcctaag
ttttttgattggttagatgagaagtcatgtttaaatggaatcatgaaagcaattgcaaaa
ttttatgtccctctccctctttcttatgaagaaagtgatgtgaagagcatcagatccttg
gagtcatgcttagaagattatttgtttcctgaatttcgccgaagggtaatttgcccaaaa
aaagtatttgaagagaagtgcatatatcagatcacgagtttaccgcggctctataatgtt
ttcgaacgttgttaa
DBGET
integrated database retrieval system
