Schizosaccharomyces pombe (fission yeast): 2539956
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Entry
2539956 CDS
T00076
Symbol
pub3, SPOM_SPBC16E9.11C
Name
(RefSeq) HECT-type ubiquitin-protein ligase Pub3
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo04011
MAPK signaling pathway - yeast
spo04120
Ubiquitin mediated proteolysis
spo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
2539956 (pub3)
09130 Environmental Information Processing
09132 Signal transduction
04011 MAPK signaling pathway - yeast
2539956 (pub3)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
2539956 (pub3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spo04131
]
2539956 (pub3)
04121 Ubiquitin system [BR:
spo04121
]
2539956 (pub3)
03029 Mitochondrial biogenesis [BR:
spo03029
]
2539956 (pub3)
Enzymes [BR:
spo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
2539956 (pub3)
Membrane trafficking [BR:
spo04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
2539956 (pub3)
Ubiquitin system [BR:
spo04121
]
Ubiquitin ligases (E3)
HECT type E3
2539956 (pub3)
Mitochondrial biogenesis [BR:
spo03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
2539956 (pub3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
2539956
NCBI-ProteinID:
NP_595793
PomBase:
SPBC16E9.11c
SPBC16E9.11c.1
UniProt:
O14326
LinkDB
All DBs
Position
II:complement(join(1935777..1937958,1938301..1938479))
Genome browser
AA seq
786 aa
AA seq
DB search
MEQGAKRVRFYIVAADGLSKRDLFRQPDPFAILTVDGEQTHTTKVIKKSVNPYWNEGFEV
TVKPSSVISIRLFDQKKFKKKDQGFLGLVSFRMREVGSFRSNREVSLTRPLKKSSTTNLS
VLGNLVLKVAPSKIRAPAGNHSSTTANRTTSTPTTTTARTTRTTPRPTATTNTSNQSTSN
STRNGTSAATSNGTGTGAGTGASHRSSPVTNRQTNNTSALSNSNAHIMSSFEDQYGRLPP
GWERRADSLGRTYYVDHNTRTTTWTRPASSTNPVHNTSSDSQRLNHQNRHLPDDSNPSLM
QSDSGNDLPFGWEMRYTDTGRPYFVDHNTRTTTWVDPRNPLVRPNGGSSTVGSLMQPQSL
SHLGPLPSGWEMRLTNSARVYFVDHNTKTTTWDDPRLPSALDQDVPQYKCDFRRKLIYFR
SQPGMRPLPGQCNVKVRRDHIFEDSYAEIMRYSAHDLKKRLMIRFDGEDGLDYGGLSREF
FFLLSHKMFDPIYCLFEYSAVDNYTLQINPHSSINPEHLNYFRFIGRVIGLAIFHRRFLD
AFFVVSLYKKLLRKKVSLADMESIDAEFYRSLKWVLENDITGILDLTFSVEEDHFGEVRT
VELITNGENIEVTEENKKKYVDLVTEWRVSKRVEQQFNAFYSGFVELVSPDLVNVFDERE
LELLIGGISDVDVEDWKSHTEYRTYIATDPVIKWFWEIIAGWKNEDRSKLLQFATGTSRI
PVNGFRDLQGSDGPRKFTIEKAGTPDQLPVAHTCFNRLDLPDYPSKDTLHEKLSLAVENT
VGFGNE
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaggagcgaaaagagtccggttctacatagtagctgctgatggattaagtaaa
cgggatctttttcgacagcccgatccctttgctattttaacggtagatggcgagcaaact
catacaacgaaagttattaaaaaatcggtgaacccttattggaatgaaggatttgaagta
actgttaagccatctagcgttatatccatacgcctttttgatcagaaaaagttcaaaaag
aaagatcaaggcttccttggcttagtatcctttcgtatgcgtgaagttggtagttttcga
tcaaatcgcgaagtgtcgcttactcgaccattgaaaaaatcttccaccactaatctttcc
gttttgggaaatctcgtattgaaggtggccccgtctaaaattagggctcccgccggaaat
cactcatctactacagccaatcgcactactagtacacctacaaccacaactgcacgtact
actcgtactactccccgtccgactgccacaactaatacctcgaatcagtccacttcgaat
tcgactcggaatggcacttctgctgcaacttcaaatgggactggtactggcgctggtact
ggcgcaagtcatcgttctagtcctgtaaccaatcgccagactaacaatactagtgctctt
tcgaattcgaatgcacatatcatgtcatcgtttgaagaccaatatggacgtcttcctcca
ggttgggaacgccgtgctgactctctaggtcgcacttattatgttgatcataatacgcgc
actaccacctggactcgtccggctagcagtacaaatcctgtacataatacgtcgagtgat
agccaaagacttaatcatcagaacagacatttacctgatgactctaatccatctttaatg
caatcagattccggaaacgaccttcctttcggctgggaaatgcgatacacagatacaggc
cgcccatattttgttgaccataatacgcgaactaccacatgggttgatccacgaaatccc
cttgtgcgacctaatggtggctcttctactgtgggtagcttgatgcagccacagtcactt
tcgcatttgggtcccttacctagtggttgggaaatgcgtcttacaaatagtgcccgtgtc
tattttgttgatcacaatacgaaaacaaccacttgggacgatccacgtcttccttctgcc
ttggatcaagatgttcctcaatacaaatgcgattttcgtcgcaaacttatatatttccgt
tcacaacctggtatgcgtcctttacctggccaatgcaatgttaaggtacgcagagatcac
attttcgaagattcatatgcggagattatgcgttattctgctcatgacttgaaaaagaga
cttatgatacgttttgatggtgaagatggtctagattacggtggtttgtctagagagttt
ttcttcctcttatcacataaaatgtttgacccgatttattgcttatttgagtactccgct
gtcgacaattacactctgcagattaatcctcattctagcattaaccctgagcatctcaat
tatttccgtttcattgggcgtgttataggtttggcaatttttcatcgccgttttcttgac
gctttctttgttgtttctctctacaagaaattattacgtaaaaaggttagtctagctgac
atggaaagtatcgatgctgagttttatcgaagcttgaagtgggttttggaaaatgatatc
accggcattttggatttaacattcagcgttgaagaagaccattttggggaagttcgtact
gttgagcttataaccaatggtgaaaacattgaagtcactgaagaaaacaagaagaaatat
gttgatttggttactgaatggagagtttccaaacgtgttgagcaacaatttaatgcattt
tattctggttttgttgaactggtatcccctgatttagtgaatgttttcgacgaaagagaa
cttgaattgttaattggtggtatatccgatgttgatgttgaagactggaagagccacacc
gagtatcgcacttatattgctaccgatcctgttatcaagtggttttgggaaattattgct
ggctggaagaacgaagatcgttcaaagttattacagttcgctacaggcacatcacgcatt
cctgtcaatggttttagggatttgcaaggaagtgatggacctcgcaagtttactattgaa
aaggcaggtacaccggatcaacttccagtagcacacacatgtttcaatcgcttggattta
cctgattatccttcaaaagatacactgcatgaaaaattgagcctagccgttgaaaacacg
gtagggtttggaaacgagtaa
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