Schizosaccharomyces pombe (fission yeast): 2539968
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Entry
2539968 CDS
T00076
Symbol
rix7, SPOM_SPBC16E9.10C
Name
(RefSeq) AAA family ATPase Rix7
KO
K14571
ribosome biogenesis ATPase
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
2539968 (rix7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spo03009
]
2539968 (rix7)
Ribosome biogenesis [BR:
spo03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
2539968 (rix7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_14
AAA_33
TIP49
AAA_28
RNA_helicase
nSTAND3
AAA_2
AAA_18
NPHP3_N
Mg_chelatase
AAA_17
AAA_3
Vps4_C
ABC_tran
AAA_7
NACHT
NB-ARC
Rad17
IstB_IS21
Cytidylate_kin2
TsaE
DUF815
ATPase
Parvo_NS1
Zeta_toxin
Viral_helicase1
AAA_19
SKI
Sigma54_activat
ATP-synt_ab
CPT
Motif
Other DBs
NCBI-GeneID:
2539968
NCBI-ProteinID:
NP_595792
PomBase:
SPBC16E9.10c
SPBC16E9.10c.1
UniProt:
O14325
LinkDB
All DBs
Position
II:complement(join(1931899..1933328,1933372..1933800,1933860..1934025,1934087..1934401))
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AA seq
779 aa
AA seq
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MRRSGTSLSRDLERKIHERLVSLKDTIQQTEIEEWPVSTRRAIQFVQERDMSLRRIKKPI
LEKVVEKVLDTLKAEVEEKLASSQDLVLVDSDMEEQSDSNLMEVKDTNVINKSITSLWSS
PNLKEIDGEDEKKSVGQESITGSAKRKDRRSKTNGSKRQKAEANREPPSDISLSDIGGLD
DCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELGVPFISIS
APSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAVTPKRESAQREMERRIVAQFLT
CMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAREKILRTMAK
GLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIKRIFNEISPLNKLDLNSDPRFNE
LDSDMALDSNDSLPLDHSSIIQRYLNAHPDPLSPEELEPLAICPQDFIEALAKVQPSSKR
EGFATVPGVSWNNIGALKSIRVELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKT
LLAKAVANESKANFISIRGPELLNKYVGESERAVRQVFLRARASSPCVIFFDELDAMVPR
RDDSLSEASSRVVNTLLTELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLP
DAHERVEILKTLTKQTPLHEEVNLDVLGRDERCSNFSGADLAALVREAAVTALRSAVFAD
IASNEPEITQHSALEPIRVTNADFELAFKNIKPSVSDRDRQKYQRLAKRWSSASTNDAD
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggtctggtacatcgcttagtcgtgatttggagcggaaaattcatgaacgtttg
gtttctttgaaagataccattcaacaaacagaaattgaagagtggccagtttctactcgt
cgggctattcaatttgttcaagaaagggacatgtctcttcgaagaattaagaagccaatc
cttgaaaaagttgtcgaaaaagttttagacacattgaaggccgaagtggaggaaaaatta
gcttcctctcaggatttagtacttgttgatagcgacatggaagaacaatctgactcaaac
ttgatggaagttaaggataccaatgtgattaacaaaagcatcactagtctttggagctct
ccaaacttgaaagaaatagatggagaagatgagaaaaagtctgttggtcaggaatcgatt
actggatctgccaaaagaaaagatcgtcgatccaagactaatggttcaaagcgtcaaaaa
gcggaagcgaatagagaaccaccaagtgacatttctttgagtgatataggaggactagat
gattgtattaacgaattgcttgagctagtcgcaatgccgatcaagcatcctgaagtatac
caatatactggaattcatcctcccaggggtgtactgttacatggtcctcccggttgtggt
aaaactatgttagccaacgcattagccaacgaattgggtgttcccttcatctctatatct
gctccctctattgtttctgggatgtccggcgaatctgaaaaaaaagttagggaggtcttt
gaagaggctaaatcgttagccccctgtttgatgtttatagatgaaattgatgccgttact
cccaaacgtgaaagtgctcaaagagaaatggaacgtaggattgtcgctcaattccttaca
tgcatggacgaactttcttttgagaaaactgatggcaaacctgtcttggtaattggtgct
actaatagacctgattcgttagatagtgcattacgccgtgcaggaagatttgacagagaa
atatgcttgaccgtcccaagtcaagacgctcgcgagaaaattttacgtactatggcaaag
ggtttgaaacttagtggagattttgacttccgtcaattagcgaagcagacgcctggttat
gtgggtgccgacctaaaagcactcactgctgctgccggcattatagcaataaaaaggatt
ttcaatgaaatttctccgctgaacaaattggaccttaattctgatcccagatttaatgaa
cttgacagtgatatggccttagattcaaacgacagcttaccccttgatcattcttctata
attcaaagatatttgaatgctcatcctgatccactatctccagaggaacttgaaccactc
gctatttgtccacaagattttattgaagcactcgccaaagttcaaccttcgtctaaacgt
gaaggatttgctaccgttccaggtgtttcttggaataatattggtgcactaaaatcaatt
cgtgtcgaattacaaatggccatcgttcagcccatcaaacgtccggagctttaccaaagc
gttggtatcagtgcacctacaggcgttttactatggggtcctcctggatgtggtaaaact
ctgttggctaaagcggttgcaaatgaaagtaaagcaaattttatatccattcgtggtcca
gaattgcttaataagtatgttggtgagtcagaacgtgcagtgcgacaagttttcctcaga
gcacgtgcatcttctccatgtgttatcttttttgatgaattagatgcgatggtacccagg
cgtgatgactcactgtcagaagcctcgtcaagagttgtaaatacccttcttactgaactg
gacggtcttagcgatcgttcaggagtttatgtaattgctgctaccaatcgaccggatatt
atagatccagcaatgctgcgtcctggtcgtttagataaaacattgcttgttgatttaccg
gatgctcatgaacgggtggagattttaaaaacgttgacaaaacagacgcccttacacgaa
gaggtaaatttggatgtacttggtcgagatgaaagatgcagtaatttttcgggtgcagat
ttggctgcccttgtgcgtgaagcagctgtgacagctctgcgatcagccgtttttgcagat
attgcttcaaatgaaccagaaattacacaacattcagcattagagccaattcgtgtgaca
aatgctgactttgagttagcattcaagaatatcaagccaagtgtctccgatcgcgatcga
caaaagtaccaacgactggcaaagcgttggtcttcggcaagtacaaatgatgctgactag
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