Schizosaccharomyces pombe (fission yeast): 2540002
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Entry
2540002 CDS
T00076
Symbol
arc1, SPOM_SPBC14C8.06
Name
(RefSeq) ARP2/3 actin-organizing complex WD repeat subunit Sop2
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo04138
Autophagy - yeast
spo04144
Endocytosis
spo04517
IgSF CAM signaling
spo04519
Cadherin signaling
spo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
2540002 (arc1)
04519 Cadherin signaling
2540002 (arc1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
2540002 (arc1)
04138 Autophagy - yeast
2540002 (arc1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
2540002 (arc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spo04131
]
2540002 (arc1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
spo04812
]
2540002 (arc1)
Membrane trafficking [BR:
spo04131
]
Others
Actin-binding proteins
Arp2/3 complex
2540002 (arc1)
Cytoskeleton proteins [BR:
spo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
2540002 (arc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_Aladin
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR3_2nd
WDR55
EIF3I
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
2540002
NCBI-ProteinID:
NP_595909
PomBase:
SPBC14C8.06
SPBC14C8.06.1
UniProt:
P78774
Structure
PDB
PDBj
LinkDB
All DBs
Position
II:join(2214438..2214510,2214558..2215618)
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AA seq
377 aa
AA seq
DB search
MATSQVLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTC
VDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSG
ARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDV
DAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQP
PRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGNESGWAHTRDLDAGTSKTSFT
HTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNI
TAFTSSGTDGRVVLWTL
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggctacctctcaagttttacacattcttcctaaaccctcttacgaacacgcgttcaat
agtcaaagaacagagtttgtcaccacaactgctacgaaccaagttgaactttacgagcaa
gatggaaatgggtggaagcatgcccgaacatttagcgatcacgataagattgtaacttgt
gtcgattgggctccgaaatccaatcgaatcgtaacttgctctcaagaccgtaatgcctat
gtttatgagaaacgtcctgatgggacttggaagcagaccctcgtcttacttcgtttgaat
cgtgccgctacgtttgttcgttggtcgcctaacgaggacaagtttgctgttggtagtggt
gctcgtgtcatttctgtttgctactttgaacaagaaaatgactggtgggtcagcaaacat
ctgaaacgtccgcttcgtagtaccattttgtctttggactggcatcctaataacgtttta
ttagctgccggctgtgcagaccgtaaggcatacgttttatctgcttatgttcgtgatgtc
gatgccaaaccagaagccagcgtttggggttcacgtttacctttcaacactgtttgcgct
gaatacccatctggtggttgggttcacgccgttggattttcaccttcgggtaatgcctta
gcgtatgctggccatgattcttctgttacgattgcatatcccagtgctcccgagcaaccc
ccacgagctctaattactgtcaaattatctcaattgcctttgcgttctcttctttgggcg
aatgagagtgccattgtggctgctggctataactattctcctattcttttgcaaggcaat
gagtccggttgggcccatactcgcgatttggatgccggaacttccaagacctcattcact
cacacaggaaatactggtgaaggtagagaggaagagggtcctgtttcatttactgctctt
cgtagcacattccgtaacatggatttgaagggctccagccagtctatttcgtctttacca
accgttcatcaaaatatgattgcaacccttcgaccttacgctgggactcctggcaatatt
actgcgtttacctccagcggtaccgacggacgtgttgttttgtggactctttag
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