Schizosaccharomyces pombe (fission yeast): 2540002
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Entry
2540002 CDS
T00076
Symbol
arc1, SPOM_SPBC14C8.06
Name
(RefSeq) ARP2/3 actin-organizing complex WD repeat subunit Sop2
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo04138
Autophagy - yeast
spo04144
Endocytosis
spo04517
IgSF CAM signaling
spo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
2540002 (arc1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
2540002 (arc1)
04138 Autophagy - yeast
2540002 (arc1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
2540002 (arc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spo04131
]
2540002 (arc1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
spo04812
]
2540002 (arc1)
Membrane trafficking [BR:
spo04131
]
Others
Actin-binding proteins
Arp2/3 complex
2540002 (arc1)
Cytoskeleton proteins [BR:
spo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
2540002 (arc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_Aladin
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR3_2nd
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
2540002
NCBI-ProteinID:
NP_595909
PomBase:
SPBC14C8.06
SPBC14C8.06.1
UniProt:
P78774
Structure
PDB
PDBj
LinkDB
All DBs
Position
II:join(2214438..2214510,2214558..2215618)
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AA seq
377 aa
AA seq
DB search
MATSQVLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTC
VDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSG
ARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDV
DAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQP
PRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGNESGWAHTRDLDAGTSKTSFT
HTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNI
TAFTSSGTDGRVVLWTL
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggctacctctcaagttttacacattcttcctaaaccctcttacgaacacgcgttcaat
agtcaaagaacagagtttgtcaccacaactgctacgaaccaagttgaactttacgagcaa
gatggaaatgggtggaagcatgcccgaacatttagcgatcacgataagattgtaacttgt
gtcgattgggctccgaaatccaatcgaatcgtaacttgctctcaagaccgtaatgcctat
gtttatgagaaacgtcctgatgggacttggaagcagaccctcgtcttacttcgtttgaat
cgtgccgctacgtttgttcgttggtcgcctaacgaggacaagtttgctgttggtagtggt
gctcgtgtcatttctgtttgctactttgaacaagaaaatgactggtgggtcagcaaacat
ctgaaacgtccgcttcgtagtaccattttgtctttggactggcatcctaataacgtttta
ttagctgccggctgtgcagaccgtaaggcatacgttttatctgcttatgttcgtgatgtc
gatgccaaaccagaagccagcgtttggggttcacgtttacctttcaacactgtttgcgct
gaatacccatctggtggttgggttcacgccgttggattttcaccttcgggtaatgcctta
gcgtatgctggccatgattcttctgttacgattgcatatcccagtgctcccgagcaaccc
ccacgagctctaattactgtcaaattatctcaattgcctttgcgttctcttctttgggcg
aatgagagtgccattgtggctgctggctataactattctcctattcttttgcaaggcaat
gagtccggttgggcccatactcgcgatttggatgccggaacttccaagacctcattcact
cacacaggaaatactggtgaaggtagagaggaagagggtcctgtttcatttactgctctt
cgtagcacattccgtaacatggatttgaagggctccagccagtctatttcgtctttacca
accgttcatcaaaatatgattgcaacccttcgaccttacgctgggactcctggcaatatt
actgcgtttacctccagcggtaccgacggacgtgttgttttgtggactctttag
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