Schizosaccharomyces pombe (fission yeast): 2540023
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Entry
2540023 CDS
T00076
Symbol
pus4, SPOM_SPBC11C11.10
Name
(RefSeq) tRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spo03016
]
2540023 (pus4)
Enzymes [BR:
spo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
2540023 (pus4)
Transfer RNA biogenesis [BR:
spo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
2540023 (pus4)
Prokaryotic type
2540023 (pus4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
2540023
NCBI-ProteinID:
NP_596400
PomBase:
SPBC11C11.10
SPBC11C11.10.1
UniProt:
O59721
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Position
II:join(3365690..3365894,3365998..3367016)
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AA seq
407 aa
AA seq
DB search
MTVTNTYNPTLFFTRVVFQRITKFTAKANEENEILFYALFVADLCLDMKGGLIAINKPSG
RTSAQCLNELKKIISNSELAQYFRPAPPHPNDRNRRRRKSNRLPDIKIGHGGTLDPLASG
VLVVGLGTGTKQLSSLLSCMKTYRATALFGCSTDTYDSAGKIIKIAVHIPTKEEILSGLD
AFRGDISQLPPLYSALHIQGKRLYEYAREGIPLPESIKARSMHCEELILKDFIPKEEHTY
TDPDEFASKEAIESEELLRPIEGGAERHDLLAKTEQDINPQDGDEKINAKSPTTNSVTDV
AKDQTVTNPKKRKFEVTDLARGSRPAIGPIAVLDMTVSSGFYVRSLIHDLGRQVNSEAHM
VDLVRLKQGSFALDDENCFDFSEFSAPGWEEKLAAAFKIDLKGDETS
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcacaaatacttataaccctaccctatttttcacaagggtagtatttcaaagg
ataacgaagtttactgctaaagcaaatgaagaaaatgaaatcttgttttacgcccttttc
gtcgctgatttatgcttagatatgaaaggtggattaatagccataaataagccttctggt
agaacctctgctcaatgcttaaatgaattaaaaaaaataatttcaaacagtgagctagct
caatattttcggcctgctcctccacaccctaacgatcgtaatcgaagacgaagaaaatca
aacagactaccagatataaagattggacatggaggtaccttagaccctcttgcttctgga
gttttggtagtgggattgggtacaggaacaaagcaactttcatcattactttcatgtatg
aaaacttaccgagcgacagccctgtttggctgctcgacagatacctatgattctgctgga
aaaataattaagattgctgtacacatccctactaaagaggaaatattatctggtttagac
gcttttcgaggtgacatctctcagttacctcctctttactctgctctgcatattcaaggt
aagagactatatgagtatgcacgcgaaggaattcctttacctgaaagtatcaaagcacga
tctatgcattgcgaagaattaattttaaaagattttattccgaaggaagaacacacctac
acggatccggatgaatttgcttcaaaggaggcaattgaaagtgaggaacttttaagacct
attgagggaggtgccgaacgtcatgatttacttgcaaagacagagcaagacatcaatccc
caagatggtgatgaaaaaataaacgcgaagagtcccactaccaattctgttacagatgta
gccaaagatcaaactgtcacaaaccctaaaaaacgaaagtttgaagtcactgatttagcg
cgaggatcacgacctgcaatagggccaattgcagtccttgatatgacggtttcttctggt
ttctacgttcgctctttaattcatgatttgggccgacaagtaaatagtgaagcacacatg
gtcgatcttgtgagattgaaacaggggtcttttgcactagacgatgaaaactgctttgat
ttttcagaattttcagctccaggctgggaggaaaaactcgcagcagcgttcaaaatcgac
ctgaaaggagacgaaacaagctga
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