Schizosaccharomyces pombe (fission yeast): 2540032
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Entry
2540032 CDS
T00076
Symbol
top1, SPOM_SPBC1703.14C
Name
(RefSeq) DNA topoisomerase I
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spo03032
]
2540032 (top1)
Enzymes [BR:
spo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
2540032 (top1)
DNA replication proteins [BR:
spo03032
]
Eukaryotic type
DNA Topoisomerases
2540032 (top1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
2540032
NCBI-ProteinID:
NP_596209
PomBase:
SPBC1703.14c
SPBC1703.14c.1
UniProt:
P07799
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All DBs
Position
II:complement(join(2942037..2944367,2944414..2944514,2944568..2944580))
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AA seq
814 aa
AA seq
DB search
MSSSDSDSVSLSIRRRQRRGSSKRISMKESDEESDSSENHPLSESLNKKSKSESDEDDIP
IRKRRASSKKNMSNSSSKKRAKVMGNGGLKNGKKTAVVKEEEDFNEIAKPSPKHKRVSKA
NGSKNGAKSAVKKEESDTDDSVPLRAVSTVSLTPYKSELPSGASTTQNRSPNDEEDEDED
YKWWTSENIDDTQKWTTLEHNGVIFAPPYEPLPKNVKLIYDGNPVNLPPEAEEVAGFYAA
MLETDHAKNPVFQDNFFRDFLKVCDECNFNHNIKEFSKCDFTQMFHHFEQKREEKKSMPK
EQKKAIKQKKDEEEEKYKWCILDGRKEKVGNFRIEPPGLFRGRGSHPKTGSLKRRVYPEQ
ITINIGEGVPVPEPLPGHQWAEVKHDNTVTWLATWHENINNNVKYVFLAAGSSLKGQSDL
KKYEKSRKLKDYIDDIRKGYRKDLKSELTVERQRGTAMYLIDVFALRAGNEKGEDEADTV
GCCSLRYEHVTLKPPRTVVFDFLGKDSIRYYNEVEVDPQVFKNLKIFKRPPKKEGDLIFD
RLSTNSLNKYLTSLMDGLSAKVFRTYNASYTMAEELKKMPKNLTLADKILFYNRANRTVA
ILCNHQRSVTKNHDVQMERFAERIKALQYQRMRLRKMMLNLEPKLAKSKPELLAKEEGIT
DSWIVKHHETLYELEKEKIKKKFDRENEKLAAEDPKSVLPESELEVRLKAADELKKALDA
ELKSKKVDPGRSSMEQLEKRLNKLNERINVMRTQMIDKDENKTTALGTSKINYIDPRLTY
SFSKREDVPIEKLFSKTIRDKFNWAADTPPDWKW
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgtctgattcagattccgtgtctttatccattagaaggaggcaaagacgcggt
tcatctaaacggattagtatgaaggagtcggacgaagagagtgatagttctgaaaatcat
cctcttagtgaatcgttgaataagaaatccaaatccgagagtgatgaggatgatataccg
attagaaagagacgtgcttcttcaaagaaaaatatgtccaattcaagctctaaaaaaaga
gctaaagtaatgggaaatggtggtttaaaaaacggaaaaaaaacggcggttgtaaaagag
gaagaggatttcaatgaaattgcaaagccctcaccgaagcataaacgtgtttctaaagcg
aatggaagtaaaaatggcgcgaagtcagctgttaaaaaagaggaaagtgacacagatgat
tcagttccattgagagctgtttcgactgtatctttaactccttacaaatcagaactgcct
tcgggagcttcgaccacgcaaaatcgctcaccaaacgatgaggaagatgaagatgaggat
tacaagtggtggacttcagaaaatatcgatgatactcaaaaatggactacattggagcat
aatggtgtaatttttgctccaccctatgaacctttaccaaagaacgtcaagctaatttac
gatggaaaccccgtaaatcttcctcccgaagcagaagaagttgctggtttttatgctgca
atgcttgaaaccgatcatgccaaaaatcctgtattccaagataattttttccgtgacttc
ttaaaggtctgtgatgaatgtaactttaatcacaacattaaagagttttctaaatgtgat
tttacccaaatgtttcaccattttgagcaaaagagggaagagaagaagagtatgccgaag
gaacagaagaaggcaataaagcagaaaaaagatgaggaagaggaaaaatataaatggtgc
atacttgatgggagaaaggagaaggttggtaactttcgtattgaacctccagggttattt
cgtggtcgaggtagtcatcctaaaactggttctttaaagcgtcgagtatatcctgaacaa
attaccattaatattggtgaaggtgtacccgttccagaaccactccctgggcatcaatgg
gcggaggtaaagcatgataatacagtgacctggttggcaacctggcatgaaaatataaat
aataatgtcaaatatgtctttttagctgcaggaagttctctaaaaggacagagtgactta
aaaaaatacgaaaagtcaagaaagcttaaggattatattgatgatatccgtaaaggctac
cggaaagatttgaaaagtgagttaacggttgagcgtcaaagaggaactgccatgtattta
attgatgtttttgctttaagagcaggaaatgaaaagggtgaagacgaggcggatactgtt
ggttgttgttcactgcgatatgaacatgttacactgaagccaccacgaacagtcgttttc
gattttcttggtaaagattctattcgttactacaacgaggttgaagttgatccccaagtt
tttaaaaatctaaagatctttaaacgtcctcccaaaaaagagggtgatttaattttcgac
cgtctcagtacaaacagtcttaacaaatatctgactagccttatggatggactttcagct
aaagtatttcgtacctacaatgcttcatacaccatggccgaggaacttaagaaaatgcct
aagaacctcacccttgcagacaaaatactattttataatagggcaaataggactgttgca
attttatgtaatcatcaacgttccgtaaccaaaaatcacgatgttcaaatggaacggttt
gccgaaaggattaaggcattacaataccagcggatgagactgcgaaaaatgatgctgaat
ttagagcccaagcttgctaaaagcaagcccgaattgctggctaaagaagaaggcattacc
gattcatggatcgtaaaacatcacgagacactttacgaactagaaaaagagaaaataaaa
aagaaattcgatcgtgagaacgaaaaattagctgctgaggatcccaaatcagtgcttccg
gaatctgaattggaagttcgattgaaagcggctgatgagttgaagaaagcgctggacgct
gaacttaaaagcaaaaaagtcgatccaggtcgttcttcgatggaacaacttgagaaaaga
ttaaacaaactcaatgaacgaattaatgttatgcgtactcagatgatcgataaagacgag
aataaaactactgctttgggtacaagtaagattaactacatagacccgaggcttacttat
tcgttcagcaagcgagaagacgttcctattgagaagctgtttagtaagacgattcgtgac
aagttcaattgggctgctgatacacctccggattggaagtggtaa
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